Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01182 ATGAAGCTTCCCTCTTCTTCCCTTTTGTTCACTCTCACAATCCTCTTTTGTTCTCTCAACTCTCTAGGTTTTACCAACCTTCTCACCCAACAAACATGCAAGAATTGCTCAAAAACCGACCCCAACATAAGCTACAAATTCTGTGTAGAATCTTTCAAATCCAACCGTAGGAGCCAACATGCCAAAAGCCTCCAAGAACTAGGTCTAATCTCCATCCAGATAACAAGGCACAACGTGACAGATACCAAAGCTCGCATCAATGATCTTTTGGAGAAAAACAAGAGCTTAGACCCATTTATCAAAGAATGCTTAGATGATTGTCTTGAAGTCTATTCTGACACCATTCCCACTTTCAGAGAAGCCATTAGAGATTACAGGGCCAAACGCTATGCAAATTGCAATGTGAAGCTAAGCTCAGTCATTGATGCCTCCACCACATGTGAAGATGGATTCAAGCAGAAGAACAATGATGCTGTTTCTCCACTCACAAAAAGAAACAAGGATACCTTTCAGCTTTCAGCTATATCACTTTCCATTGTTAACATGCTCGTCGATAGGGATATATAA 567 0.4074 MKLPSSSLLFTLTILFCSLNSLGFTNLLTQQTCKNCSKTDPNISYKFCVESFKSNRRSQHAKSLQELGLISIQITRHNVTDTKARINDLLEKNKSLDPFIKECLDDCLEVYSDTIPTFREAIRDYRAKRYANCNVKLSSVIDASTTCEDGFKQKNNDAVSPLTKRNKDTFQLSAISLSIVNMLVDRDI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01182 188 CDD PMEI-Pla_a_1_like 33 182 IPR034088 -
Spst4g01182 188 PANTHER OS02G0537100 PROTEIN 7 183 - -
Spst4g01182 188 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 184 IPR035513 -
Spst4g01182 188 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 183 IPR035513 -
Spst4g01182 188 Pfam Plant invertase/pectin methylesterase inhibitor 30 179 IPR006501 GO:0004857
Spst4g01182 188 FunFam Putative invertase inhibitor 24 183 - -
Spst4g01182 188 SMART PMEI_2 28 179 IPR006501 GO:0004857
Spst4g01182 188 NCBIfam pectinesterase inhibitor domain 5 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01182 Spst-Chr4 45615783 45616349 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01182 - - gmx:100306248 300.441