Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01172 ATGGGAAGTGTTGAAGCTGCAAACAAGGATGCAAATGGAAGCCTCCCAGGGAAAAATCTTACCGTTGTTTTTGTGTTAGGTGGCCCAGGCAGCGGGAAGGGTACACAATGTGCAAATATTGTTGAAAAGTTTCTGTTTACTCACCTCAGTGCTGGTGATCTTTTGCGAGCAGAAATCAAGTCTGGTTCCGAAAATGGTACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTGCAAAAAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAATGAGGAAAACCGTGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGCATTTGTCCTATATTTTGATTGTCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGTCGAGAAGATGATAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCTAGTCTGCCCGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGATTGATGCTGCAAGACCTATTGAAGAGGTATTTGAGACAGTCAAAGGAATTTTTGGTCCAAAGAATGAGAAGGTAAATCACTATGTTCGTCTTATGCTGATTGAGCATGCTCACCTTTATTCCATGGTGGAAATTTAG 681 0.4053 MGSVEAANKDANGSLPGKNLTVVFVLGGPGSGKGTQCANIVEKFLFTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMQESGNDKFLIDGFPRNEENRAAFEKVTGIEPAFVLYFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKIDAARPIEEVFETVKGIFGPKNEKVNHYVRLMLIEHAHLYSMVEI 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01172 226 NCBIfam UMP-CMP kinase family 22 199 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Spst4g01172 226 Pfam Adenylate kinase 25 177 - -
Spst4g01172 226 PRINTS Adenylate kinase signature 24 37 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst4g01172 226 PRINTS Adenylate kinase signature 164 178 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst4g01172 226 PRINTS Adenylate kinase signature 52 66 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst4g01172 226 PRINTS Adenylate kinase signature 100 116 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst4g01172 226 PRINTS Adenylate kinase signature 147 162 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst4g01172 226 Gene3D - 9 199 IPR027417 -
Spst4g01172 226 CDD ADK 22 191 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst4g01172 226 FunFam Adenylate kinase 1 16 202 - -
Spst4g01172 226 Hamap Adenylate kinase [adk]. 21 200 IPR000850 GO:0005524|GO:0006139|GO:0019205
Spst4g01172 226 ProSitePatterns Adenylate kinase signature. 100 111 IPR033690 -
Spst4g01172 226 Hamap UMP-CMP kinase [CMPK1]. 20 202 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Spst4g01172 226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 199 IPR027417 -
Spst4g01172 226 PANTHER NUCLEOTIDE KINASE 10 196 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01172 Spst-Chr4 45338945 45342365 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01172 K13800 - gmx:100500111 387.882