Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01171 ATGCTACCTGGGAGGTTCTCGTTTTTCGGAGGCGGAGATTCCCGCGTGGTGGACAACGCCAATTCGCCACCGAAGGGTGAGGAACCTCCGGCCGTTGTCCCCCCCACACTGAAGCTCGAAACCGATAGGCAGGTTTACAGGCCCGGTGATCCTGTCGTTGTGACCATTCAGATCTCTAATCCCGCAAATGGGTACTCGTTTCTGATGGAAAGACTCGGGTTTGAGATCAGGGGCATCGAGAAATTGGACACTCAATGGTTCGCCACGCAGAAGCCTTTGCATGGCTCCAAACAGAGGAGAGGTTCGTTGATACTGAACAAGCTACGACTTGGTATTGTGAATGTGATTAGTGAACCTGATAATTCTCTGCCATCACAATCAGAAAATGTTAAATCGTTTCTGAAAGCTTTGGACGCAGTAGGATTGCCCCGGTTTGAAATATCAGACCTAGAAAAGGGGTCTATGAAGGCTGTTGTGGATTATGTGGTGCGAACGCAGCTGCCTAGCATTATTCCGCCATCTTACAAGGGTTCAAATATTCGCTATTTGTACTATGTTAAAAGTGCAGTAACTGGAGGGTGGATAATATTTGAAAATGGGCAATCTCGTGCAGATTCCAAAAATGATGTTACTGATTTGTTTTTTGGAGATGTAAAACCAAAGACAGTCATGAGCCTTTATCTAGCAATTAAGCTTCTGGGAGAGTTAGTTCATGTTCATCACACATTATTAGAGCCCATTTATATTGTTCCCTTAACTACTACACAACTGGATATATTTTGGAAAGAGATGGATGGTGATGCTGATTGGCTAGATTACAATCTTATGAAACACACCAACCACAATGACATGGATATGGAGATTGAGGAGATGTGGGTTAGAGCAAATGATATGTATGATGGAGTTGAGGAGGGCTATGACAGCTCAAGAGATGACATCTCATCTGTTTCTTCGTATAACGCCATGAAAGAGAGTCTATACAGAGGCTTTGGAAGTTCATTATCACTGGGATCTTCTTCTGCAAGATCATTGACCAGGGATGCATCTACATTAGAAGGTTTTCGAACAAGTTTATCTTCAAATTTGGCACTTCCTCGGCTTTCTGTTGCTGAAGTGTTATCTGATTCTGGTGCTGATGTCTTGTCAAGCCAAAAGTCATTTGCCATTGTGTCCCCAAATGAGAAACAGAAGCTGCAAAAGACATTTTCTGCACAAGAAGATATGGGAGTATCCTCTTCACCTGAAGCTGGGGCTGTAGAATCTTTTTCATCAGAAGGCTTTATTAGAGGAAGGTCTTACAATATCCGACTTGATGATCAAGTTTTGCTTAAATTTTCCCCAAAAAATTCCGACTCAACTTATTACTTTAGTGATATGATAGGTGGCACTCTCACTTTCTTTCATGAAGAAGGAGCTAGGAGATGCCTTGAGATCTCGATAACATTGGAAACTTCAGAAACTATAAATAGACGGTTTGTCCACCCTTCTAGAAGGAATTCTCCTACAATTACAAAGGTTCAGAGTGATCATCATGAGGTTGTAGCAGATTTGTTGCAGACAAGCTTTCTGTTTTCTATCCCCATGGATGGTCCAATGTCCTTCTCAACTCAACATGTTTCTGTGCAGTGGGTTCTCCGCTTTGAATTTTTCACAACTCCAAAGCATGTAGATTGGAGAAAGTATGATCATCCTCTTTTGATTGAGGCAAGGGAAAAAACGGAATGGATTCTCCCAATTACTGTACATCCTCCACCACCAAGAGCTCCTGCTTCTGGCACAAGAAACGAGAAACTTTTCTCTTTGGATCCTATGTGGGTACACACTTGA 1827 0.4258 MLPGRFSFFGGGDSRVVDNANSPPKGEEPPAVVPPTLKLETDRQVYRPGDPVVVTIQISNPANGYSFLMERLGFEIRGIEKLDTQWFATQKPLHGSKQRRGSLILNKLRLGIVNVISEPDNSLPSQSENVKSFLKALDAVGLPRFEISDLEKGSMKAVVDYVVRTQLPSIIPPSYKGSNIRYLYYVKSAVTGGWIIFENGQSRADSKNDVTDLFFGDVKPKTVMSLYLAIKLLGELVHVHHTLLEPIYIVPLTTTQLDIFWKEMDGDADWLDYNLMKHTNHNDMDMEIEEMWVRANDMYDGVEEGYDSSRDDISSVSSYNAMKESLYRGFGSSLSLGSSSARSLTRDASTLEGFRTSLSSNLALPRLSVAEVLSDSGADVLSSQKSFAIVSPNEKQKLQKTFSAQEDMGVSSSPEAGAVESFSSEGFIRGRSYNIRLDDQVLLKFSPKNSDSTYYFSDMIGGTLTFFHEEGARRCLEISITLETSETINRRFVHPSRRNSPTITKVQSDHHEVVADLLQTSFLFSIPMDGPMSFSTQHVSVQWVLRFEFFTTPKHVDWRKYDHPLLIEAREKTEWILPITVHPPPPRAPASGTRNEKLFSLDPMWVHT 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01171 608 PANTHER REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED 34 589 IPR014848 -
Spst4g01171 608 MobiDBLite consensus disorder prediction 13 32 - -
Spst4g01171 608 Pfam Rgp1 418 551 IPR014848 -
Spst4g01171 608 SUPERFAMILY Calponin-homology domain, CH-domain 104 163 IPR036872 -
Spst4g01171 608 Gene3D - 103 167 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01171 Spst-Chr4 45313836 45327288 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01171 K20477 - gmx:100795634 811.601