Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01166 ATGGCTTCAAGGCCCGGAATCCTCACGGATTGGCCATGGAAACCTCTTGGAAGCTTTAAGTATGTGGTACTAGCTCCATGGGTGGTTCACAGCACCTACTCTGTGATAGTGAAGGAGAAGAATGAAAAGGACGTATCAACCTTTCTGATATTACCATTTTTGCTATGGCGAATGCTTCATAACCAGATTTGGATCACTCTCTCTCGTTACAGAACAGCCAAGGGAAATGCTAGAATTGTGGATAAGGGACTTGAATTTGAACAAGTTGACAGAGAAAGAGAATGGGATGACCAAATATTGTTCAATGGGTTACTATACTATTTGGCATGCTACACATTATCTGGTGCATCCAATCTTCCATTATGGAGAACAGATGGAGTGGTTATGGCATTTTTGCTTCATGCAGGACCAGTGGAGTTTCTTTATTACTGGTTACACAGAGCACTTCATCATCACTTTCTCTACTCTAGATACCACTCTCACCATCACTCTTCCATTGTCACAGAGCCTATAACTTCTTCTGTGGGAGCCATGGTGGCTTATGTCACTTACATTGACTTCATGAATAATATGGGTCATTCCAACTTTGAGGTTGTTCCAAAGTGGCTCTTTCAAATCTTCCCTCCTCTTAAATATCTCATGTACACCCCATCGTTTCATTCTTTGCACCACACCCAGTTTAGAACAAACTACTCCTTATTTATGCCATTTTATGACTACGTCTATGGCACCACAGATAAGGCTTCTGATACATTATATGAATCAGCATTAAAACGAGAAGAAGAAACCCCAGATGTTGTGCACCTTACACATCTCACAACCCCTGAATCCATCTATCATCTCAGGCTTGGGTTTGCTTACTTGGCTTCTAAGCCTTACATATCAAAATGGTACCTCAGTTTGATGTGGCCTATGACAGCATGGTCCATGATCCTCACATGGGTCTATGGCAGAACATTCATTGTTGAGGCAAATCGTTTTGACAAACTCAAGCTTCAAACTTGGGCAATTCCCAAGTACAGTCTGCAATACTTTCTGCAATCACAAAAAGTGACTATCAACAGAATGATAGAAGAAGCAATACTGGATGCAGACAGAAAAGGCATAAAAGTGTTGAGCTTAGGCCTAAGAAATCAAGGAGAGGAGCTTAACATCTATGGAGGGTTATATGTTAGTAGACATCCAAAGTTGAAAGTTAAGATTGTAGATGGAAGCAGTCTTGTGGTTGCTGTTGTTCTTAACAGCATTCCCAAAGGAACAACACAAGTGTTGCTTAGGGGAAAACTCACTAAGGTTGCCTATGCTCTTGCCTTCTCATTGTGTCAAAAAGGTGTTCAGGTTGCTACATTGCATGAGGATGATTATGTGAGGCTCAAAAAGTCATTCAAGTGCTCTGAAACTAATTTGACCTTTTCCAAAAGCAACACACAGACGACTTGGTTAGTAGGAGATGGACTGAGTGAAGAAGAACAACAAAAAGCACCCAAAGGAACATTATTTATTCCATACACACAATTTCCACCAAAGAAATATCGCAAGGATTGCTTCTACCATTCCACCCCAGCAATGTTAGCTCCTTCGTCTGTCGAAAACATCCATTCTTGTGAGGTTAGATTGGTTGGCAAGAAGGGTGATGAGTGCATGGCGCATAGCTGGGATAGTCCACTCTCTAGAAGGATGGAGTGA 1686 0.4152 MASRPGILTDWPWKPLGSFKYVVLAPWVVHSTYSVIVKEKNEKDVSTFLILPFLLWRMLHNQIWITLSRYRTAKGNARIVDKGLEFEQVDREREWDDQILFNGLLYYLACYTLSGASNLPLWRTDGVVMAFLLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSSVGAMVAYVTYIDFMNNMGHSNFEVVPKWLFQIFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYVYGTTDKASDTLYESALKREEETPDVVHLTHLTTPESIYHLRLGFAYLASKPYISKWYLSLMWPMTAWSMILTWVYGRTFIVEANRFDKLKLQTWAIPKYSLQYFLQSQKVTINRMIEEAILDADRKGIKVLSLGLRNQGEELNIYGGLYVSRHPKLKVKIVDGSSLVVAVVLNSIPKGTTQVLLRGKLTKVAYALAFSLCQKGVQVATLHEDDYVRLKKSFKCSETNLTFSKSNTQTTWLVGDGLSEEEQQKAPKGTLFIPYTQFPPKKYRKDCFYHSTPAMLAPSSVENIHSCEVRLVGKKGDECMAHSWDSPLSRRME 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01166 561 Pfam Fatty acid hydroxylase 175 244 IPR006694 GO:0005506|GO:0008610|GO:0016491
Spst4g01166 561 PANTHER STEROL DESATURASE 13 539 - -
Spst4g01166 561 Pfam WAX2 C-terminal domain 423 539 IPR021940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01166 Spst-Chr4 45249992 45257974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01166 1 536 Lipid Metabolism Gene Families AT1G02190 56.993 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01166 K15404 - gmx:100818020 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01166 4 45249992 45257974 Spst4g01166 4 45249992 45257974 ECH