Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01147 ATGGATGCTCAACATACAGTTGTTCATCAAGTTGTAGTGCTCAATGTCATTGCTCGTGTGTACACAGGTAAGGAGTGGAGGAAAAGGCAAATTAGAAAGATAACAGACCAAGTTTTTAACCAAGTAAAGAATGAAGTGAGACCTGATAATTTGAGTTTTGAAGATCTGTATATTGCTATTTTACTTGTCTACAATGGCATCAACAAGTATATTCCTCGTCCCCATTTTGATCCTCCTTCAAAAGAAAGAGTCAGACAAATCATTGAGCACAGTGATAAGAACAAGGATGGACATATTGATCGTGATGAATTTTTCGGTTTCTTCCAGAAAATGGCACCTGAAATATTCAATGTTGTTCGTAGAAAACTTGTAGCCACTTTGGTTGTAGCACCAACAGTTGCAGCAACAACAAAAAAGGCTACTGAAAATGTCCCAGGTGTTGGGAAACTGGTGCAAAGCTTTGCACTTTACACAGGTAAGGAATGGAGGAAAAGGCAAATAAGAAAGATAACTGATCGAGTTTTTGCAAAAGTACAGAATCAAATGGAGAGTGATAAGCTGAGTTTTGAAGATCTGTATATTGCTGTTTTACTTGTGTACAATGATATCAACAAGTATATACCTGGTCCTCATTTTGACCCTCCATCAAAAGCCAGAGTCACAGAAGTCAAAGAGAAATGTGATATCAACCTTGATGGGGATATTGACCGAGAAGAGTTTTACGATTTCATCCTGCAAATGACAGCTGATACATTCACTGTTGTAAGCCAAAAACTTATTGTCACTTTGGTTGTAGCACCAACAGTTGCAATGGCAACAAAAAAAGCCACTGAAGGTGTTCCAGGTGTTGGGAAACTGGTGAAGAAGATACCCAATTCAGTTTATGCTTCTCTAGTGACCATTGCAGCTGTGTGGTTCCAGAAAAGGGCTCAAATTTCTTCACTGTAG 948 0.3871 MDAQHTVVHQVVVLNVIARVYTGKEWRKRQIRKITDQVFNQVKNEVRPDNLSFEDLYIAILLVYNGINKYIPRPHFDPPSKERVRQIIEHSDKNKDGHIDRDEFFGFFQKMAPEIFNVVRRKLVATLVVAPTVAATTKKATENVPGVGKLVQSFALYTGKEWRKRQIRKITDRVFAKVQNQMESDKLSFEDLYIAVLLVYNDINKYIPGPHFDPPSKARVTEVKEKCDINLDGDIDREEFYDFILQMTADTFTVVSQKLIVTLVVAPTVAMATKKATEGVPGVGKLVKKIPNSVYASLVTIAAVWFQKRAQISSL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01147 315 ProSitePatterns EF-hand calcium-binding domain. 92 104 IPR018247 -
Spst4g01147 315 Pfam EF hand 228 243 IPR002048 GO:0005509
Spst4g01147 315 Pfam EF hand 92 104 IPR002048 GO:0005509
Spst4g01147 315 Gene3D - 27 257 - -
Spst4g01147 315 SUPERFAMILY EF-hand 38 246 IPR011992 -
Spst4g01147 315 SMART efh_1 83 111 IPR002048 GO:0005509
Spst4g01147 315 SMART efh_1 219 247 IPR002048 GO:0005509
Spst4g01147 315 PANTHER CALCIUM ION-BINDING PROTEIN 27 152 - -
Spst4g01147 315 ProSiteProfiles EF-hand calcium-binding domain profile. 79 114 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01147 152 305 EF-hand Containing Proteins AT1G64850 64.935 1.60e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01147 - - gmx:100527595 280.796