Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01144 ATGTACAAAGTGATGGGATCTGTTCTAAGGCACGATACATACTTTTATAAGGTGTTCAAGGTGTACACACAATTATGGAAGTTTCAGCAGGAGAATCGGCAGAAGCTAGTTGAAGCAGGGCTTAGGAGATGGGAAATTGGTGAGATTGCATCTCGCATTGGTCAACTGTATTTTGGGCAGTACATGCAAACAAGTGACGCAAATTATCTATCAGAGTCATATATATTCTATGAGGCCATTTTGACTCGGGAGTATTTTAAGGAGGGATTGTTTCAGGATGTGAATATTGCAAACAAACAATTGAGGTTTCTCGCTAGATTCATAATGGTGTGTTTGATTTTGAATCGAAGGGAAATGATGCAGCAATTGGTTAATCAGCTTAAAGCATTAGTTGATGATTGCAAGAGAGCGTTCCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGGTTCAAGAAATAGTCAGATTTTTAAAAGCTGACACTGCTTTTATGAATCTCAGGCCACTAAGATACAGTCTAGTTTTGGACCCTCATCCTGATACCTTGCCACATGTTGCTGCAGCCATTGCGAAGCGACATTTGAAACTACGAGATGCTGTATTAAGTAGTTTCCATCAAAATGAGGTAAAGTATTCAGAGCTCACTATTGACACTTTTAGGATGCTTCAATGTCTGGAGTGGGAACCCAGTGGCTTATTTTACCAGTCTAGCAGTTCAAAACTTAGCCAAAATGGGGCTAGCGGGACTAGTCGTATCAGTTACATCCAAGACATTGCTGACCCTACTTTACCAGCAAACCCACGGAAAGCTGTGTTATACCGTCCTGCATTAACACATTTTATAGCTCTTCAGGTAAAGATGAACTCTGTCTTTTCAACATCAAATGCAGGATATTGTAGTGATGAATCTGGTTGCATTCACTTTGGTCCTCGTGGAGATAGAGGATCAAACTGCATATATCCTTCTGACTTTCTGCCATTTACTAGAAGACCACTTCTTTTAATCATTGATAATGACAACAGCAACGCTTTTAAGGCCATAGCTGATGCAGAAAAGGGAGAGCCAGTTGCTATGCTCCTTTCACCAAGCTGTTCTCCTGCTGTGTCTGATTGCTCACATCATTCAAATGGGGGCCTGTTCACCATGTTTCTTACAGCTCCGCTGCAAGCTTTCTGTCTTCTGCTAGGACTTTCAGGCACTGATATTGATTTGGACACATTCAACAAAGCTGAAATGTCACTCACATCTTCACTAAATAACTGGGGACTAGCATTGGCAACATCGGACACGCTTAATCCTGTTTGGGGGCAGATTTTAGGTGATCCCTTCATAAGGAGGCTTATTTTGAGATTCATATTTTGTCAGGCAGTGTTGACCCTATATGCACCAGTTTACAAAGAAAACAAATTCCTTCCTACATGTGTCCCTTCTCTTCCTATTCCTGTCCTGCCTCCAAACTACTCGTATCAGAGTGTAATTCTGAATTTAGCCAGCATGTTTGGTGGAACTAAGCATTTCATCTTCTCAGAGGATGTTCTTCGTGAAAATTTACAAACCAACATGAATCAGTTGACTCTATGA 1581 0.4099 MYKVMGSVLRHDTYFYKVFKVYTQLWKFQQENRQKLVEAGLRRWEIGEIASRIGQLYFGQYMQTSDANYLSESYIFYEAILTREYFKEGLFQDVNIANKQLRFLARFIMVCLILNRREMMQQLVNQLKALVDDCKRAFQESDFKEWKLVVQEIVRFLKADTAFMNLRPLRYSLVLDPHPDTLPHVAAAIAKRHLKLRDAVLSSFHQNEVKYSELTIDTFRMLQCLEWEPSGLFYQSSSSKLSQNGASGTSRISYIQDIADPTLPANPRKAVLYRPALTHFIALQVKMNSVFSTSNAGYCSDESGCIHFGPRGDRGSNCIYPSDFLPFTRRPLLLIIDNDNSNAFKAIADAEKGEPVAMLLSPSCSPAVSDCSHHSNGGLFTMFLTAPLQAFCLLLGLSGTDIDLDTFNKAEMSLTSSLNNWGLALATSDTLNPVWGQILGDPFIRRLILRFIFCQAVLTLYAPVYKENKFLPTCVPSLPIPVLPPNYSYQSVILNLASMFGGTKHFIFSEDVLRENLQTNMNQLTL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01144 526 PANTHER PROTEIN SCAI 11 282 - -
Spst4g01144 526 Coils Coil 120 140 - -
Spst4g01144 526 Pfam Protein SCAI 10 283 IPR022709 GO:0003714|GO:0006351
Spst4g01144 526 Pfam Protein SCAI 300 462 IPR022709 GO:0003714|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01144 Spst-Chr4 44713091 44726212 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01144 - - gmx:100810202 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01144 4 44713091 44726212 Spst4g01144 4 44713091 44726212 ECH