Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01128 ATGACGGGATGCAAGATCTTAATGTTCATAGGTGGTTTGTTTTTCCTCGTGGGTGCGCTGTTGAATGCTTTTGCCATCAATATTGAAGTGCTTATCATAGGTCGTTTATTGCTTGGTTTTGGTGTTGGATATTGTAATCAGTCTATACCTATGTATTTGTTTGAAATGGCCCCAACAACAATAAGAGGTGCACTCAATATTGGATTTCAAATGATGATCACAATTGGCATCTTAATTGCAAACCTTATCAACTATGAGACTTCCAAACTAGAATATGGTTTTGATAACAATACTTCCCTTATGTCTTTGGTTATCATTGGAGGTGTTAATGTGGTTGCCACTTTTGTTTCCATTTTCTCCGTGGACAAGTTTGGAAGAAGGATGTTGTTCCTCGAAGGTGACATTCAAATACTTATTTGTCAGCTTGTTGTTGGAACCATGATTGATATGAAGTTTGGAGTGAGTGGTGAAGACTCGTTTACCTATGGAGAAGCTAGTCTCCTCTTATTCTTCATATGTGCATATGTTGCAACATATGCATGGTCTTGGGGTCCACTAGGGTGGTTGGTTCCTAGTGAAATATGTTCTTTTGAGGTTCGACCTTCTGGTCAAGGGACCAATGTTGCTATAAACATGTTCTTCACCTTTGTTATTGCTCAAAATTTTCTAACCATGCTTTGTCACTTGAAGTTTGACATTTTCTTCTTCTTTGCTGGATTTGTGTTCATCATGACCATTTTTGTTGCCTTGTTCTGA 756 0.381 MTGCKILMFIGGLFFLVGALLNAFAINIEVLIIGRLLLGFGVGYCNQSIPMYLFEMAPTTIRGALNIGFQMMITIGILIANLINYETSKLEYGFDNNTSLMSLVIIGGVNVVATFVSIFSVDKFGRRMLFLEGDIQILICQLVVGTMIDMKFGVSGEDSFTYGEASLLLFFICAYVATYAWSWGPLGWLVPSEICSFEVRPSGQGTNVAINMFFTFVIAQNFLTMLCHLKFDIFFFFAGFVFIMTIFVALF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01128 251 ProSitePatterns Sugar transport proteins signature 1. 117 133 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst4g01128 251 Gene3D MFS general substrate transporter like domains 1 90 IPR036259 -
Spst4g01128 251 Gene3D MFS general substrate transporter like domains 91 251 IPR036259 -
Spst4g01128 251 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 251 IPR020846 GO:0022857
Spst4g01128 251 Pfam Sugar (and other) transporter 3 92 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst4g01128 251 Pfam Sugar (and other) transporter 96 251 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst4g01128 251 SUPERFAMILY MFS general substrate transporter 91 251 IPR036259 -
Spst4g01128 251 SUPERFAMILY MFS general substrate transporter 3 85 IPR036259 -
Spst4g01128 251 ProSitePatterns Sugar transport proteins signature 2. 37 62 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst4g01128 251 PRINTS Sugar transporter signature 241 251 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst4g01128 251 PRINTS Sugar transporter signature 32 51 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst4g01128 251 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 92 251 IPR045262 GO:0015144
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01128 Spst-Chr4 44407898 44410433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01128 47 90 Organic Solute Cotransporters AT1G50310 79.545 2.80e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01128 K24193 - cam:101503949 236.498