Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01116 ATGCTAGGTTCTATTCAAAGAGGAAGAGAAGCAGTGTGCCTGAGAAGAGGGCTAGAGCAGTGCGATGTTAGGTTCTATCCAAAGAGGAAGAGAAGCAGTGTGCCTGAGAAGAGGGCCAGAGCAGTGCACTTCTTTGCTATGGAAGACACGGATTCAGTTGCTACGCTGATAGATTCTACAACTTCCAAGATACAACAGCTGCAAAAGGCGTTTGCTGAACTTGAAAATTACCGTGCTGTTACTCTGAACTGGAAATGGAAAGAACTAGAGGAACATTTTCATGGTCTTGAAAAATCCTTGAAAAGGCGCTTTCATGAATTGGAAGACCAGGAAAAAGAGTTTGAGAACAAAACGAGGAAGGCTCGTGAAATACTGGAAAAGCGGCAAGCAGCTGTTTATGCCAAGGAGCAAGCCACGTTGCAGAGGCTTCAGGAGAAACGAGATGCTGCTGTATTTGATATTGTGACTGCTCGAGAAAAGCACAGGAAGGTTTCGTCAAATGAATTAGCTATTGTCTCTAATAGGGGTAATGGGACGCTGTGTGTGGAGGAGAAACCTGTAGATGCTGTGTCGTTTGTGGCTAAAGGTAATTTGGGAGATGTGGAACTTTCTCCTGAAAATGGAAAGGTGGAGTTGTCTTATCCAGAATTGCTAAAATTATGTAAAGAGATGGATGCTGCTGGACTTCACAAATTCATATCTGATAATCGCAAGAACCTTGCTGCTGTAAGGGAGGAAATACCACATGCATTAAGAGCTTCTCCTAACGCTGCCTGTTTAGTTTTAGATTCTCTGGAAGGATTTTACTGTACAGAAGTGTCAAATCAGGATGTAAAGAAGGATGCTAACTTATTGGGTCTTCGCCGAACATGTATCATGCTGATGGAATGTCTATGTGATTTCCTGAGCAACTCAAATAGTGTTTCTAATGTAATTTCAGAAGATATCAAGGACAGGGCAAAGGCAGTTGCTGAAGAATGGAAACCCAGATTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTGCAACTTCTAGCCAGTTTTGGTATTGCATCTGGTTTTAATGAGGAGGAGTTATCCAGGCTAATTCCAATGGTATCCCGACGTCGGCAAACTGCTGATTTGTGCCGTTGTCTTGAGTTGTCAGAGAAGATGCCTGGTGTCATCGAAGTTTTGGTGAATAATGGGCGGCAAATTGATGCTGTTAACTTGGCATTTGCATTTGAGCTTACGGAACAATTTTCACCCATTCCTTTACTGAAGTCTTACTTGAAGGATGCTAGGAAAACTTCTTCTCCCGTCAAAAGTGTTAACTCATCTCCCACATCACAGATTGATGTTAATGAGCGAGAGCTGATTGCACTTAAGGCTGTAATTAAGTGCATTGAAGATCATAAACTTGATGACCAGTATCCTCTGGATCCTCTCCAGAAACGAGTGACCCAACTCGAGAAGGCGAAGGCTGACAAGAAAAGGGTAACTGAAGCAACAAAGCCTCAACCCAAGAGACCTCGTGCCAACGGTGCGGGATATGGTCCACGTGTCACTAACTTTCCATCTGACAAAACTTCGTATGCTAGAGTTGCTGACAGGTATCCTCAATATGTGTATGACCGATCTTACATGTACCCTGGACCAACTGACAATCACTGCCCCCCTCTCATGGGTTCTGCAACTTACAACATCTCTCCCAGTCCTGTCAACTACTTTGGGAATGGTTATCAGTACCAAGCTACATATCTCCACTAG 1773 0.4365 MLGSIQRGREAVCLRRGLEQCDVRFYPKRKRSSVPEKRARAVHFFAMEDTDSVATLIDSTTSKIQQLQKAFAELENYRAVTLNWKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTRKAREILEKRQAAVYAKEQATLQRLQEKRDAAVFDIVTAREKHRKVSSNELAIVSNRGNGTLCVEEKPVDAVSFVAKGNLGDVELSPENGKVELSYPELLKLCKEMDAAGLHKFISDNRKNLAAVREEIPHALRASPNAACLVLDSLEGFYCTEVSNQDVKKDANLLGLRRTCIMLMECLCDFLSNSNSVSNVISEDIKDRAKAVAEEWKPRLDALDMDASNGNSLEAHAFLQLLASFGIASGFNEEELSRLIPMVSRRRQTADLCRCLELSEKMPGVIEVLVNNGRQIDAVNLAFAFELTEQFSPIPLLKSYLKDARKTSSPVKSVNSSPTSQIDVNERELIALKAVIKCIEDHKLDDQYPLDPLQKRVTQLEKAKADKKRVTEATKPQPKRPRANGAGYGPRVTNFPSDKTSYARVADRYPQYVYDRSYMYPGPTDNHCPPLMGSATYNISPSPVNYFGNGYQYQATYLH 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01116 590 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 61 515 - -
Spst4g01116 590 MobiDBLite consensus disorder prediction 491 527 - -
Spst4g01116 590 Pfam Frigida-like protein 213 502 IPR012474 -
Spst4g01116 590 Coils Coil 97 127 - -
Spst4g01116 590 Coils Coil 57 77 - -
Spst4g01116 590 MobiDBLite consensus disorder prediction 491 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01116 Spst-Chr4 44073519 44082614 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01116 - - gmx:100806993 986.867