Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01115 ATGCGGAACAAGAATCCGCTTTCTCCGTTCGGTTTCTGTTGGCGTGATTCTGAAGGTTTGGATCTGGATATCTGTGGTAAGTTCATACTGCTGCACATGGTTTGTATGTATGTAATTTTAAATTTGGTTTTTGTTTCATTATTTATCTTCAGCTTCTTTGCTATGGAAGACTCAGATTCAGTTGCTACATTGATGGATTCTACAACTTCTAAGATACAGCAGCTGCAGAAGGCATTTGCTGAACTTGAAAGTTATCGGGCTGTTACTCTCAACATGAAATGGAAGGAACTAGAGGAGCATTTCCATGGTCTTGAGAAATCCTTGAAAAGGCGCTTTCATGAATTAGAAGACCAAGAAAAAGAGTTCGAAAACAAGACAATGAAGGCTCGTGAACTGTTGGAGAAGCGGGAAGCAGCTGTTTTTGCCAAGGAGCAAGCTTCGCTCCAAGGGCTTCAAGAGAAAAGAGACGCTGCTGTATTTGCCATTGTAAATGCTCGAGAAAAGCACAGGAAGATTTCATCACGTGAATTGGCTGCTGTTTCAAATGGCTGTAAAGGAGGGATACCAGGTGTGGAAAAGAAACCTCTGGATACTTTGTCCACTGCTGCTGAGGGTAATTTAGAAGATGTAAAACTTCCTGAAAATGGAAATGTGGAGTTGATATCTTATCCAGAGTTGGTGAAACTTTGCAAAGAGATGGATGCTTCTGGAATTCACAAATTCATATCTGATAACCGTAAGAACCTTGCTGCTGTAAGGGAGGAAATACCAAATGCTTTAAGAGCTGCTCCTAATGCTGCCCGTTTAGTTTTAGATTCTCTGGAAGGATTTTACTCTACTGAAGTGTCAAATCAGGATGTAAAGAAGGATGCTAACTTATTGGGTCTTCGCCGAACTTGTATCATGCTGATGGAATGTCTCTGTGATTTCCTGAGCAACTCAAATTTTGTTTCTAATGTAATTTCAGAAGATATCAAGGACAGGGCAAAGGCAGTTGCTGAAGAATGGAAACCTAGATTGGATTCTCTTGACATGGATGCTAGTAATGGGAATTCCTTGGAGGCTCATGCTTTTTTACAACTTGTAGCTAGTTTTGGTATTGCCTCTGGTTTTGATGAGGAGGAGTTATCCAGATTGATTCCAATGGTCTCTCGACGTCGCCAAACTGCCGATTTATGTCGTTTCCTTGGGCTTTCAGATAAGATGTCTGGTGTAATTGAGGTTTTGGCGAACAGTGGGCGGCAAATTGATGCTGTTAACTTGGCTTATGCATTTGATCTTACTGAACAATTTTCTCCCGTTTCTTTACTGAAGTCTTACTTGAAAGATGCAAGAAAACCTTCTTCTCCTGTTAAAAGTGTCAACTCATCTCCCACTGCACAGATTGAAGTGAATGAACGAGAGCTGGTTGCTCTTAAGGCTGTAATAAAATGCATTGAAGAACATAAACTTGAAGAGCAGTATCCTCTGGATCCTCTCCAAAAACGATTGGTGCAGTTAGAGAAGGCAAAAGCTGACAAGAAGAGAGAAACTGAAGCAACAAAACCTCAACCCAAGAGACCCCGTGCAAATGGTGCGGGATATGTTCCACGTGTCACTAACATCCCCTGTGATAAAACTTCCTATGCTAGAGTTGCTGACAGGTATCCACAGTATGTGTATGACCGACCACCTTACATGTACCCTGCGCCAACTGATAATCATTGTCCCCCTCTCATGAGCAATGCAACGTATAACATCTCTCCCAGCCTTGGCAACTACTTTGGAAATGGGTATCAGTACCAAACCACTTATCTCCACTAG 1803 0.4182 MRNKNPLSPFGFCWRDSEGLDLDICGKFILLHMVCMYVILNLVFVSLFIFSFFAMEDSDSVATLMDSTTSKIQQLQKAFAELESYRAVTLNMKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTMKARELLEKREAAVFAKEQASLQGLQEKRDAAVFAIVNAREKHRKISSRELAAVSNGCKGGIPGVEKKPLDTLSTAAEGNLEDVKLPENGNVELISYPELVKLCKEMDASGIHKFISDNRKNLAAVREEIPNALRAAPNAARLVLDSLEGFYSTEVSNQDVKKDANLLGLRRTCIMLMECLCDFLSNSNFVSNVISEDIKDRAKAVAEEWKPRLDSLDMDASNGNSLEAHAFLQLVASFGIASGFDEEELSRLIPMVSRRRQTADLCRFLGLSDKMSGVIEVLANSGRQIDAVNLAYAFDLTEQFSPVSLLKSYLKDARKPSSPVKSVNSSPTAQIEVNERELVALKAVIKCIEEHKLEEQYPLDPLQKRLVQLEKAKADKKRETEATKPQPKRPRANGAGYVPRVTNIPCDKTSYARVADRYPQYVYDRPPYMYPAPTDNHCPPLMSNATYNISPSLGNYFGNGYQYQTTYLH 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01115 600 Coils Coil 490 510 - -
Spst4g01115 600 Pfam Frigida-like protein 222 511 IPR012474 -
Spst4g01115 600 MobiDBLite consensus disorder prediction 504 530 - -
Spst4g01115 600 Coils Coil 105 135 - -
Spst4g01115 600 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 68 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01115 Spst-Chr4 44058348 44069889 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01115 - - gmx:100807523 969.533