Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01102 ATGGCTTTGCAGTTCCTGAAGCACCCCATAACCATCTCACGAGGTTTTCACAACCAGACAACGTTGGCTTTTCTTTCTCCGTTACGAAATCCGAAGCGCATATTCTCAGTGAGATGGGACAGAACTCAGATTCCAATTTCTTTCAGGAGCTATGCTTCTGCAAAATCGGAAAAGGTTTTACATGTGAAGAAGAAAAAGCGGCTGGATGAAATATGTCTTGAAAAATATCAGCATTATAGTAGATCTGTTATCCAGTCATGGATTTTGCAAGGCAAAGTATATGTGGATGGGAAGGTGATAAATAAAGCTGGTACCCCTGTGCCTGCAAAAGCTGTTGTGGAGATAATAGCCGATGTTCCCAAATATGTATGTAGAGCTGGACATAAGTTGGAAGCTGCCATTGAACAGCTTGGTGTCGATGTTACTGGCAAAGTAGCCCTTGATTCTGGGCTGTCAACAGGAGGATTTACTGACTGCTTACTTCAGTATGGTGCATCACATGTTTATGGAGTTGACGTAGGTTATGGACAGGTAGCTGATAAAATTCGAAGAGATGAACGGGTATCAGTGATAGAGCGGACAAATTTAAGATATCTTGCTGAACTCCCACAAAATGTTGATTTGGTGACTTTGGACCTTTCATTCATCTCTATTCTCTTGGTCATGCCTGCTGTGGTCAATGTCATGAAGGAAAATGCAGCATTAGTGACTTTGGTTAAACCACAATTTGAAGCTCGTAGATCTCAAGTAGGAAAAGGAGGGATAGTGAAAGATCCCATTGTCCATCAAGAGGTCCTTGAGAGGATTATAAAGGGAGTAGAGAATTTTGGTTTCTGTACTAAAGGTTGGATTGAGTCTCCTCTGAAAGGTGCTGAGGGTAAAGATTGCCATTTTTGGAAGATGTAA 906 0.4161 MALQFLKHPITISRGFHNQTTLAFLSPLRNPKRIFSVRWDRTQIPISFRSYASAKSEKVLHVKKKKRLDEICLEKYQHYSRSVIQSWILQGKVYVDGKVINKAGTPVPAKAVVEIIADVPKYVCRAGHKLEAAIEQLGVDVTGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVADKIRRDERVSVIERTNLRYLAELPQNVDLVTLDLSFISILLVMPAVVNVMKENAALVTLVKPQFEARRSQVGKGGIVKDPIVHQEVLERIIKGVENFGFCTKGWIESPLKGAEGKDCHFWKM 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01102 301 NCBIfam TlyA family rRNA (cytidine-2'-O)-methyltransferase 67 293 IPR004538 -
Spst4g01102 301 Gene3D Vaccinia Virus protein VP39 117 300 IPR029063 -
Spst4g01102 301 Pfam FtsJ-like methyltransferase 122 296 IPR002877 GO:0008168|GO:0032259
Spst4g01102 301 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 62 294 IPR047048 GO:0008168
Spst4g01102 301 CDD AdoMet_MTases 147 226 - -
Spst4g01102 301 SMART s4_6 66 131 IPR002942 GO:0003723
Spst4g01102 301 Pfam S4 domain 67 112 IPR002942 GO:0003723
Spst4g01102 301 SUPERFAMILY Alpha-L RNA-binding motif 62 244 - -
Spst4g01102 301 ProSiteProfiles S4 RNA-binding domain profile. 66 126 - -
Spst4g01102 301 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 279 IPR029063 -
Spst4g01102 301 Gene3D - 56 116 IPR036986 GO:0003723
Spst4g01102 301 CDD S4 66 115 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01102 K06442 - gmx:100781303 516.924