Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01099 ATGCAAACCCTAGTCACTTGTGCTTTGATTCTTGCTTTAATTTCACCATGTTTTGGAACCAATGACACTGTTTTTAATGTGCTAAGTTTTGGTGCTGTGGGAGATGGCAAAACAGATGATTCACAAGCATTTTTTAAAGCATGGAAGAGTACGTGTGGAGCACAAGGGACACCAGCCCTAGTTGTGCCACCAAACTATGTGTTCTTGTTGACTGGCCTATCACTAAAGGGTCCTTGCATAGCCACAACTATTCAAATTAAGCTTCAAGGGAAAATAGTTGCACCTAATAACAAGGATGCATGGTTAGGGTTTAAGAGTAGTTTGATTTCCATCACAGACGTAGTGAGGCTCACAATTGATGGAAGTGGAGGATTAATCAATGGCTTGGGTTCTACTTGGTGGCCATGCCCAACTTGTTCAAGACCAGCGGTCCTTGTTTTCAAATCATGCAGTTATCTCAGTGTTCATGACTTGAGCATCATTGACAGTCCAAAATCTCACATTCGCGTAAATGGTTGTGAGGGTGCCACATTTTCTCGTATCAATATCACTGCTCCTGTTAACAGTCCCAACACCGATGGAATTGATGTTACTTTTTCCAAAAATATCTCGATCCAGGATTCCACTATTCAAACTGGTAAACCAGATTGA 651 0.4147 MQTLVTCALILALISPCFGTNDTVFNVLSFGAVGDGKTDDSQAFFKAWKSTCGAQGTPALVVPPNYVFLLTGLSLKGPCIATTIQIKLQGKIVAPNNKDAWLGFKSSLISITDVVRLTIDGSGGLINGLGSTWWPCPTCSRPAVLVFKSCSYLSVHDLSIIDSPKSHIRVNGCEGATFSRINITAPVNSPNTDGIDVTFSKNISIQDSTIQTGKPD 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01099 216 SUPERFAMILY Pectin lyase-like 10 213 IPR011050 -
Spst4g01099 216 Gene3D - 18 214 IPR012334 -
Spst4g01099 216 Pfam Glycosyl hydrolases family 28 52 213 IPR000743 GO:0004650|GO:0005975
Spst4g01099 216 PANTHER - 22 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01099 Spst-Chr4 43837990 43840622 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01099 2 213 Glycoside Hydrolase AT5G27530 45.581 6.61e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01099 K01184 - gmx:121174629 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01099 4 43837990 43840622 Spst4g01099 4 43837990 43840622 ECH