Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01079 ATGGCATCAGGGAAAGAAGAGAAGAAGAAAGAAGAAGTTGAAGTGATAACTGCAATTTACAAAGTTAATCTCCATTGCAATGAATGTGGGAGGAAGATCAAGAAGCATCTGATGATGAGCCAAGGGGTGCAGGGTGTGGAAATAGATATTGAGAGAGGAGAAATCAAAGCAAAAGGGAAAATAGATCCTTTGAAAATGTTGAAGCTGATTGAGAAGAAAAGCCAGAAAAAAGTTGAATTAATATCCCCAAAAGTGAAGCCTAAGGAGATCACCATAGCAGATAAAAAACCAAACGAAATCAAAGATCCAATTATCCGCATCATCTCGGTGAAGGTTCACATGCATTGTGACAAATGTGAGGTTGACCTAGAATCTAGATTAATAAAGCACAAAGGTATTTTCAATGTGAAAACGGACCAGAAAGCTCAAAATGTTACAGTGGAAGGCACCATTGAAGTGGAGAAATTGATATCATTTCTGAGAAAAAGGGTGCACAAGAATGCTGAGATTGTTTCCATAAAGGAGGTGAAGAAGGAAGAGAAGAAGGGCACAGAGGAAGGGAAAACTTCTGTAACCACCAAAGAGAAGGATCATGGTGAATCAACCAAGAAAAAAGATGGTGATGATAGTGGTAAAGTTTCTGGTGAATCAGCCAAGAAAAAAGATGGTGATGGAAGTGGTAAGAGTTCTGGTGAATCAGCCAAGATAAAGGATGGTGATGAAACTGCTAAAAGTTCTGGTGAATCGGCCAAGAAAAAAGATGGTGATGAAACTGCTAAAAAATCTGGTGAATCAACCAAGGAAAAAGGTGGTGAGACAACCAAAATAATAGAGACTCGTGAAGGGCACCCCAAAGAGGAGGCTAAGATTAAGGACAATGTTCCTTATATTATTCACTATGTCTATGCACCACAACTCTTCAGTGATGAGAATCCAAATTCATGTTCTATTTTATAA 957 0.3856 MASGKEEKKKEEVEVITAIYKVNLHCNECGRKIKKHLMMSQGVQGVEIDIERGEIKAKGKIDPLKMLKLIEKKSQKKVELISPKVKPKEITIADKKPNEIKDPIIRIISVKVHMHCDKCEVDLESRLIKHKGIFNVKTDQKAQNVTVEGTIEVEKLISFLRKRVHKNAEIVSIKEVKKEEKKGTEEGKTSVTTKEKDHGESTKKKDGDDSGKVSGESAKKKDGDGSGKSSGESAKIKDGDETAKSSGESAKKKDGDETAKKSGESTKEKGGETTKIIETREGHPKEEAKIKDNVPYIIHYVYAPQLFSDENPNSCSIL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01079 318 CDD HMA 24 72 IPR006121 GO:0046872
Spst4g01079 318 CDD HMA 113 165 IPR006121 GO:0046872
Spst4g01079 318 MobiDBLite consensus disorder prediction 178 288 - -
Spst4g01079 318 SUPERFAMILY HMA, heavy metal-associated domain 106 162 IPR036163 GO:0046872
Spst4g01079 318 Gene3D - 12 78 - -
Spst4g01079 318 Pfam Heavy-metal-associated domain 110 165 IPR006121 GO:0046872
Spst4g01079 318 Pfam Heavy-metal-associated domain 21 76 IPR006121 GO:0046872
Spst4g01079 318 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 4 317 IPR044577 GO:0046872
Spst4g01079 318 SUPERFAMILY HMA, heavy metal-associated domain 18 73 IPR036163 GO:0046872
Spst4g01079 318 ProSiteProfiles Heavy-metal-associated domain profile. 15 78 IPR006121 GO:0046872
Spst4g01079 318 ProSiteProfiles Heavy-metal-associated domain profile. 105 172 IPR006121 GO:0046872
Spst4g01079 318 Gene3D - 106 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01079 Spst-Chr4 43517402 43526806 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01079 - - gmx:100783418 382.489