Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst4g01078 | ATGGAGTTCAGTTTTGACGAGAAAGACTTCGTATCGTGCTGTGGAAGCACCAAATTCGCCAAGGACATGGTTTTGGCCTCTCCTTTCAGTTCGTTGGAGCACGCAATTTCTGTCGCTAGGAAAATTTGGTTCAACAACGTTGATGTCAACGGTTGGCTTCAGGCCTTCTCTGCGCACCCTCAGATCGGGCATACTCACGCTCCCTCTGTCGCATCTGAAGCCAGTGCTCAGTGGAGTAAGGGAGAGCAATCAACTGCTTTATCTACTGCCACTGGTTCTAGCTTACAGGAACTATCTGAATGGAATGCTCAGTATAGGGAAAAGTTTGGGTTTGTTTTTCTCATTTGTGCATCTGGAAGAAGTACTAATGAGATACTCGCTGAGCTGAAGAGACGATATACAAACAGGCCAATCGTTGAATTTGAGATTGCTGCTCAGGAGCAAATGAAAATTACAGAACTACGCCTTGCCAAGCTCTTTTCAAGTAGGGAAGACATTTCTTCTAAATCTGCTAAAAAGGCAGAAGAAGATCGTATTAGCATCATCAGTAGCCATGTGACTGCTGCTTCAGAGAGTTCATCAGGTAAACCAATTCACCATCCTGCTAGAACCCGCCCCCCCATTACCACTCACGTGTTGGATGTTTCCCGGGGCGCTCCGGCTGCTGGCGTTGAGGTACTTCTGGAGGTGTGGAGAGGCGTGCAGTCTCGGCCGCCATTTGGGGCCACAGGCGGTGGCAGTTGGGTGTTTCAGGGGTCATCGACAACGGATCCAGACGGCCGCAGCGGTCAACTGCTGAGCTTAGTTGACGATGTGAGTCCAGGAATATACAGGATAAGTTTCAACACGGGGAAGTACATCCCAAATGGTTTCTTTCCTTATGTGTCTATAGTGTTTGAAATCAAGGAGTCACAAAAAGGGGAACATTTTCATGTTCCTCTCCTGCTTTCTCCATTCTCATTCAGTACCTACCGTGGAAGCTAG | 984 | 0.4797 | MEFSFDEKDFVSCCGSTKFAKDMVLASPFSSLEHAISVARKIWFNNVDVNGWLQAFSAHPQIGHTHAPSVASEASAQWSKGEQSTALSTATGSSLQELSEWNAQYREKFGFVFLICASGRSTNEILAELKRRYTNRPIVEFEIAAQEQMKITELRLAKLFSSREDISSKSAKKAEEDRISIISSHVTAASESSSGKPIHHPARTRPPITTHVLDVSRGAPAAGVEVLLEVWRGVQSRPPFGATGGGSWVFQGSSTTDPDGRSGQLLSLVDDVSPGIYRISFNTGKYIPNGFFPYVSIVFEIKESQKGEHFHVPLLLSPFSFSTYRGS | 327 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst4g01078 | 327 | NCBIfam | hydroxyisourate hydrolase | 207 | 327 | IPR014306 | GO:0006144|GO:0033971 | |
| Spst4g01078 | 327 | FunFam | Uric acid degradation bifunctional protein TTL | 197 | 325 | - | - | |
| Spst4g01078 | 327 | SUPERFAMILY | UraD-Like | 12 | 161 | IPR036778 | - | |
| Spst4g01078 | 327 | ProSitePatterns | Transthyretin signature 1. | 211 | 226 | IPR023418 | - | |
| Spst4g01078 | 327 | CDD | TLP_HIUase | 206 | 327 | IPR014306 | GO:0006144|GO:0033971 | |
| Spst4g01078 | 327 | Gene3D | - | 6 | 163 | IPR036778 | - | |
| Spst4g01078 | 327 | PANTHER | 2-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE DECARBOXYLASE-RELATED | 4 | 239 | - | - | |
| Spst4g01078 | 327 | Pfam | HIUase/Transthyretin family | 208 | 326 | IPR023416 | - | |
| Spst4g01078 | 327 | Gene3D | Transthyretin/hydroxyisourate hydrolase domain | 197 | 325 | IPR036817 | - | |
| Spst4g01078 | 327 | FunFam | Uric acid degradation bifunctional protein TTL | 7 | 162 | - | - | |
| Spst4g01078 | 327 | ProSitePatterns | Transthyretin signature 2. | 310 | 322 | IPR023419 | - | |
| Spst4g01078 | 327 | PRINTS | Transthyretin signature | 207 | 227 | IPR000895 | - | |
| Spst4g01078 | 327 | PRINTS | Transthyretin signature | 305 | 327 | IPR000895 | - | |
| Spst4g01078 | 327 | Pfam | OHCU decarboxylase | 11 | 157 | IPR018020 | - | |
| Spst4g01078 | 327 | SUPERFAMILY | Transthyretin (synonym: prealbumin) | 199 | 327 | IPR036817 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst4g01078 | K13484 | - | gmx:100788368 | 575.089 |