Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01077 ATGGAGATTCATGGTGATCAATCTGCACTCTACAGGTGCAGAAACTGCCAAGTTCCTATTGCTTTCCGTGATGAACTTCTCTCCAAAAACTATATGGCAAAAACAGGGCAAGCGTTTCTGTTCTCTAATGTGAGGAACATTGTAATTGGGCAAAAGGAAGAGAGAACTCTGATAACTGGTGTGTACACCATTGCTGGCCTCTTTTGCAGCAACTGTGGTGAGGAATTAGGTTGGAAGTACCTTCAAGCTTCTGAGGCAAGACAAAAGTTCAAGGAAGGAAAATTCATACTTGAACGTTCAAAGATTGCCAAAGGGTACTAG 321 0.4237 MEIHGDQSALYRCRNCQVPIAFRDELLSKNYMAKTGQAFLFSNVRNIVIGQKEERTLITGVYTIAGLFCSNCGEELGWKYLQASEARQKFKEGKFILERSKIAKGY 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01077 106 ProSiteProfiles Yippee domain profile. 9 106 IPR034751 -
Spst4g01077 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 9 104 IPR039058 -
Spst4g01077 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 103 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01077 Spst-Chr4 43510014 43510568 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01077 - - gmx:100526937 176.407