Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01076 ATGGTGATGGATGAAGTGCAGCAAGTGGAGACACTATGTCAATGGGAACTATCTTCAATACTAAAAAAACTAGAACAAATTGAGGATTGGTACTGCATCTATAGAGACGACATACTAGCGAACAAGGTATTACACAACTTGCCTAGAATGAAAGAAGCCTTCGAGGAGATTTTAAAAGATATAGAGACCAATATCTTCAGAGCAAATGATTATTATGACTTATGGGCATTCGATGAATTTCACGAACAGGAACAGGAGGAACAAGGACAAATGAGAGGATCCACTATTGAGGGAGTGCCTTTAATCCCGTGCCTGGCACGTGGTCCAATAGTTCATTTACATAGCCACCACCACATTTGGGGTTCTGTCTTACCCTCCCACCGGAACACAGGAAACGCCCCCGAAGCCAACCTTCCCTTGGCTGCCGTTATGGCTTCACCCTCCCAAGGCGATCACCAGCAGCTTATGGTGGAGCGTAAATCACATGTGAGAGTTTTGACACTAAATAGGCCTAAGCAGTTGAATGCCCTCTCTTTTTATATGGTTTCTCGGCTACTTAAAGTTTTTTCGGAGGATGAGGAAAATTCTGATATTAAATTGGTTGTCGTGAAGGGAAATGGAAGGTCTTTTTGTGCTGGTGGTGATGTTGCAGCTGTTGCTCGTGAAGGAAGTAAAGGTGACTGGAGGTATGGTGCAAATTTTTTTCATACTGAATATAAATTGAATTACTTGATGGCAACATATAGTAAGCCCCAGGTTTCCATTCTTAATGGAATTGTCATGGGAGGTGGTGCTGGTGCTTCTGTACATGGAAGATTTCGTATCGTTACAGAGAATACGGTACTTTTTGGTTGA 855 0.4257 MVMDEVQQVETLCQWELSSILKKLEQIEDWYCIYRDDILANKVLHNLPRMKEAFEEILKDIETNIFRANDYYDLWAFDEFHEQEQEEQGQMRGSTIEGVPLIPCLARGPIVHLHSHHHIWGSVLPSHRNTGNAPEANLPLAAVMASPSQGDHQQLMVERKSHVRVLTLNRPKQLNALSFYMVSRLLKVFSEDEENSDIKLVVVKGNGRSFCAGGDVAAVAREGSKGDWRYGANFFHTEYKLNYLMATYSKPQVSILNGIVMGGGAGASVHGRFRIVTENTVLFG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01076 284 SUPERFAMILY ClpP/crotonase 153 282 IPR029045 -
Spst4g01076 284 CDD crotonase-like 157 282 - -
Spst4g01076 284 Pfam Enoyl-CoA hydratase/isomerase 163 282 IPR045004 -
Spst4g01076 284 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 151 282 IPR032259 GO:0003860
Spst4g01076 284 Gene3D - 150 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01076 Spst-Chr4 43497039 43503289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01076 140 282 Miscellaneous Gene Families AT5G65940 68.531 2.74e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01076 K05605 - gmx:100170729 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01076 4 43497039 43503289 Spst4g01076 4 43497039 43503289 ECH