Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01074 ATGTCTTCAGGATCTGCAACTAATGGCACGCCTTACCCCATCAAAACGATCGTCGTTTTGGTTCAAGAGAACCGTTCTTTCGACCACATGTTCGGTTGGATGAAGTCCCTCAACCCGGAGATCGACGGGGTCACCGGTTCGGAGTCAAACCCAGTTTCCACTTCGGATCCCAACTCGAAGCGGGTTTATTTTTCTGACCACTCCCATTATGTTGAACCGGATCCGGGGCACACGGTTGAAGATGTATACGAGCAGGTTTTCGGCGAACCGTGGAATGAATCCTCGGCAACAGAGAAACTATCACCGAGAATGGAAGGATTCGCGCAAAACTCGGTGAAGCAGAAGAAGGGTTCAACGGCGGAGACTGTGATGAACGGGTACAAACCGGATCAGCTACCGGTTTTTAAAGAGTTGGTGAAGGAGTTTGCGGTTTGTGATAGGTGGTTTGCTTCTGTTCCCGGTCCGACCCAACCGAACCGGCTCTACGTTCACTCTGCGACGTCGTATGGGTTGACCACTCAGGACACAACGAAACTTCTTGGGGGTTTGCCACAGAAGACTTTATTTGATTCTTTGGACGAAAATGGATTCAGTTTTGGAATATATTACCAATCCGTGCCATCCACTCTTTTTTATAGAAGCCTTAGGAAAGTGAAATACATAGACAACTTTCACTTCTTCGATTCAAAGTTCAAGAAGCATTGCGAGAAAGGGAAGTTGCCAAACTACGTGGTGATCGAGCAGAGATATTTTGACTTGTTGTCGAAGCCTGCGAATGACGACCACCCATCTCATGATGTTGGTGAGGGACAAAGGTTTGTGAAACAAGTGTACGAGGCACTGCGAGCAAGTCCTCAATGGAATGAAACACTGTTTGTGATCACATATGACGAACATGGAGGGTTCTATGATCATGTTCCAACACCTGTGGATGGAGTTCCACGACCAGATGACATTGCAGGTCCTGAACCATTCAAGTTTCAGTTTGATAGGCTTGGTGTTAGGGTTCCCACCATCATTATCTCTCCATGGATTGAAGCAGGAAAAGTGTTGCATGAACCTTCTGGGCCATTCGAAACATCACAGTATGAACATTCATCAATACCAGCAACTGTGAAGAAGATATTAAATCTTCCTGAGTTTTTGACAAAGCGTGATGCATGGGCTGGAACATTCGAGAATCTCTTATCTCTGAGCACCCCACGTACTGATTGTCCAGTGAAATTGGCAGAGCCTATAAAACTAAGAGAGGTTGGTGCTGCTGAAGAAGAAAAGCAACTGAGTGAATTTCAGGAAGAACTGATACACTTGGCAGCTTCACTGAATGGGGATCATAGCAAGAGTATCTACCCCAATAAGCTAACACAGAATTTAACTGTTTCTGAGGCAGTGAAATACTGTGAAGGTGCATTTGAAACATTCTTGAATGAGTGTGAGAAAGCAAAACAAAATAGAGTTGATGGATCTGAAATTGTTGATTGTGCAAAGCCGAATACTGCACCACAATCCAAAAGCTTCTTGCACAAGATGCTATCTTGCATATTATGTAATTGA 1554 0.4485 MSSGSATNGTPYPIKTIVVLVQENRSFDHMFGWMKSLNPEIDGVTGSESNPVSTSDPNSKRVYFSDHSHYVEPDPGHTVEDVYEQVFGEPWNESSATEKLSPRMEGFAQNSVKQKKGSTAETVMNGYKPDQLPVFKELVKEFAVCDRWFASVPGPTQPNRLYVHSATSYGLTTQDTTKLLGGLPQKTLFDSLDENGFSFGIYYQSVPSTLFYRSLRKVKYIDNFHFFDSKFKKHCEKGKLPNYVVIEQRYFDLLSKPANDDHPSHDVGEGQRFVKQVYEALRASPQWNETLFVITYDEHGGFYDHVPTPVDGVPRPDDIAGPEPFKFQFDRLGVRVPTIIISPWIEAGKVLHEPSGPFETSQYEHSSIPATVKKILNLPEFLTKRDAWAGTFENLLSLSTPRTDCPVKLAEPIKLREVGAAEEEKQLSEFQEELIHLAASLNGDHSKSIYPNKLTQNLTVSEAVKYCEGAFETFLNECEKAKQNRVDGSEIVDCAKPNTAPQSKSFLHKMLSCILCN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01074 517 SUPERFAMILY Alkaline phosphatase-like 126 354 IPR017850 -
Spst4g01074 517 Pfam Phosphoesterase family 14 379 IPR007312 GO:0016788
Spst4g01074 517 Gene3D Alkaline Phosphatase, subunit A 240 424 IPR017850 -
Spst4g01074 517 Gene3D Alkaline Phosphatase, subunit A 5 181 IPR017850 -
Spst4g01074 517 FunFam Non-specific phospholipase C1 239 425 - -
Spst4g01074 517 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 7 478 IPR007312 GO:0016788
Spst4g01074 517 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01074 Spst-Chr4 43444707 43449055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01074 12 515 Acyl Lipid Metabolism Gene Families AT3G03530 61.027 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01074 K01114 - gmx:100789421 915.99