Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01071 ATGGAGGGTGTAGATTGGGAGAGAGTGGAGAAATTTCCACTGTTTTGTGAGAATATAAAAGAGGCTCAAAGTGAAGCCATGGAAAATCGATGGAAAGATTTCAAGGAAACGATGATGAAACACCAGGAAATCATCCTCAAGCCGTTTGACCTGTTCGAAAACACTGCCATCCATGTTGCAACTGGCTCCAACAACCCTCGACTCCTCCAAGAGTTGATACAATTGGTGCCTGAAGCAGAAAGGTGGCAAGCTTTGTGCAAGAAGAATCGTGAGGGAAACACTGTCTTGCACGAGATTGTGTTCTCCAAAAATGTGACCCACATGGCTGATGTTGTCTTCTCGTTTGAAGATGAGTTGCACCCACCAGAAATGGAGGAGAAAAGGCCATTGCTTGAGCTCACAAACGTCAGAGGAGAAACCCCTTTGTTCATGGCTGCCATGCATGGAAAGCTCAAGATTCTCAAACACATGGCTAACCGTGCAGTCACGCATCACATGGATTTACGAAAACATTGGCATCGATCTGACGAATATAATGTTCTTCATGTCAGTGTCATTGGCCAACATTTGCATGTTGCAATTTGGCTTGTAAGAATGGATGAAGAACTTGCTCTGGAAAAGGATAAGAAGAACTTAACATGTCTTCAACTACTTTCCAAAATGCCACATGTTTTTCGAAGCCATACTCAAATGGGAGCATTTGAAGGAATTGATCATATGTGGAAGGAAAAGAAAAAACACAAGTTGGCTGATAGTCTGGCCAATATTTTGATAGAAAAAGACTTATCATGGCAAGCATCCTTTAATGAGAATAGAAGGACAAAAGTTATTAATATGCCTCGTCATCCTTTAAACGTGGTGAAAAGGAGAAGGATAAGTGCACAGAACAGGGAAGAGAGGCGTATGTACGATAAAGACCCTCCAGAACGCACAGCATTATTCATAGCAACTAAAACTGGAATTGTAGAAATTGTTGAAAAATATATTGAACTCCATCCTGCGGCTATTTATCATGTTACTGAGAATAAGCAGAACATATTGAACATGGCTGCTAAGTATCGACAGAAGAAAATTCTTGAAATCTTACAAAGAACAGGTACAATTGAAACATTGGCTGCTCAACTGACAGATAAAGAACGAACTATCTTGCATGAAGTTGCAAGGATGGATTACTACAAAGGAGAACACTTAGCTGGAGTTGCATTTCGTCTCCAAGATGAGTTGCGTTGGTATGATGTAAGTGGTTGA 1248 0.4087 MEGVDWERVEKFPLFCENIKEAQSEAMENRWKDFKETMMKHQEIILKPFDLFENTAIHVATGSNNPRLLQELIQLVPEAERWQALCKKNREGNTVLHEIVFSKNVTHMADVVFSFEDELHPPEMEEKRPLLELTNVRGETPLFMAAMHGKLKILKHMANRAVTHHMDLRKHWHRSDEYNVLHVSVIGQHLHVAIWLVRMDEELALEKDKKNLTCLQLLSKMPHVFRSHTQMGAFEGIDHMWKEKKKHKLADSLANILIEKDLSWQASFNENRRTKVINMPRHPLNVVKRRRISAQNREERRMYDKDPPERTALFIATKTGIVEIVEKYIELHPAAIYHVTENKQNILNMAAKYRQKKILEILQRTGTIETLAAQLTDKERTILHEVARMDYYKGEHLAGVAFRLQDELRWYDVSG 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01071 415 SMART ANK_2a 52 81 IPR002110 GO:0005515
Spst4g01071 415 SMART ANK_2a 137 166 IPR002110 GO:0005515
Spst4g01071 415 SMART ANK_2a 176 205 IPR002110 GO:0005515
Spst4g01071 415 SMART ANK_2a 342 373 IPR002110 GO:0005515
Spst4g01071 415 SUPERFAMILY Ankyrin repeat 39 366 IPR036770 -
Spst4g01071 415 Gene3D - 7 224 IPR036770 -
Spst4g01071 415 Gene3D - 273 402 IPR036770 -
Spst4g01071 415 PANTHER NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATED 53 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01071 Spst-Chr4 43418021 43420817 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01071 - - vun:114166816 530.406