Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00983 ATGGCTTCCCTCAATCTCTCTTCGTTGCAATCTCTCTCCTTCCATCGTTTATTCTCTTCTTTCCCCCAAAATACTCCTGCGCTTTCCTTCAATTGTCAACCAAAACTCTCCGCGAACCCGCTCCTAATTTCTCTGAAACCCTACATTTCAGAGAAGCCTCGCACGCGTGTGGTGGCGCTGGCCGTGAAGGGCCTCGACGAAACGGAGGCAGTATCGGTTTCGCCGGAGAACGACGAACTCGCTGAGAAACTGCCGTCGGGCGCCGGCGTCTACGCCGTGTACGACAAGGTCGGCGAGGTTCAGTTCATCGGTCTGTCGCGAAACATTGCGGCGAGCGTTTCGGCGCACTGGAAATCGGTGCCGGAGCTGTGTGGATCCGTTAAGGCTGGGATAGTGGAGGAACCAGACAGAGAAGCTCTAACCCAAGCATGGAAGGCTTGGATGGAAGAATACATAAAAGTCAGCGGAAAAGTTCCACCTGGCAATGAATCAGGAAATGCCACTTGGGTCAGGCAGCCACCTAAAAGGAAGCCTGATCTTCGATTAACACCTGGCCGCCATGTGCAATTAACTGTCCCTCTTGAGAACCTCATTGACACTTTGGTGAAAGAGAACAAAGTAGTTGCATTCATTAAGGGCTCTAGAAGTGCACCATTATGTGGATTCTCACAGAGGGTGATAGCGATTCTTGAAAATGAAGCAGTAGATTATGAGAGTGTAAATGTACTGGATGAAGAGTATAACTACGGATTGAGGGAAACCCTTAAAAAGTACAGCAACTGGCCCACATTCCCTCAGATTTTTGTGGATGGTGAATTGGTTGGAGGTTGTGATATATTGACCTCCATGTATGAGAAAGGTGAACTGGCGAGCTTGTTCAAAAAATAA 888 0.4887 MASLNLSSLQSLSFHRLFSSFPQNTPALSFNCQPKLSANPLLISLKPYISEKPRTRVVALAVKGLDETEAVSVSPENDELAEKLPSGAGVYAVYDKVGEVQFIGLSRNIAASVSAHWKSVPELCGSVKAGIVEEPDREALTQAWKAWMEEYIKVSGKVPPGNESGNATWVRQPPKRKPDLRLTPGRHVQLTVPLENLIDTLVKENKVVAFIKGSRSAPLCGFSQRVIAILENEAVDYESVNVLDEEYNYGLRETLKKYSNWPTFPQIFVDGELVGGCDILTSMYEKGELASLFKK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00983 295 MobiDBLite consensus disorder prediction 162 181 - -
Spst4g00983 295 FunFam Glutaredoxin 5 197 295 - -
Spst4g00983 295 SUPERFAMILY Thioredoxin-like 194 294 IPR036249 -
Spst4g00983 295 Gene3D Glutaredoxin 198 294 - -
Spst4g00983 295 Pfam Glutaredoxin 207 274 IPR002109 -
Spst4g00983 295 ProSiteProfiles Glutaredoxin domain profile. 195 295 - -
Spst4g00983 295 NCBIfam Grx4 family monothiol glutaredoxin 196 294 IPR004480 -
Spst4g00983 295 CDD GIY-YIG_AtGrxS16 89 162 - -
Spst4g00983 295 CDD GRX_PICOT_like 198 290 IPR033658 -
Spst4g00983 295 PANTHER GLUTAREDOXIN FAMILY MEMBER 41 294 IPR004480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00983 Spst-Chr4 41568726 41573099 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00983 - - vra:106774211 530.02