Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00912 ATGTCTTCTCCGTCCGTCCCCGATTCTGTTACCCGTGCCACCCCCAAAGGCCAACCCCTATCTGAGAAACGATCCATCACTGACGACAAAAGCGCCTCCGGTTTGAACCCCTCCAATCAAGATGGGGGTTCGGGGAAGCCGAAGAAGAGGAATAAAAAAAACAGTTCCCAGTGGAGAATGGAGAGGAAGCGCAAGGCCGAGGAACATTTTTCATCAATGGGAAAAGAAGAAGAAGAACCGATTCCCTTTAGAATAATGACAAGGCTTCAGAAGAGGAGACTTGAATCCGGACTTCCAATTTTCGATGACCGTTATCGAATAACCACCGGTCTTCAGAAGAGCAGATCTGAATCCACCGTTACCGATCAGACTGGGCCATCTCAATTGAATGTAACAGATCATCCTAAGAAAGTTGAGAAGTCTGAGAAAAATAAATACCCCACACAAAATATTAAGTCTTTAACATGTGAGATATGCAATACTAAAGTTATGTGTACAAATCATTACCAGCGGCATATGAATGGGAGAAAGCACTTAAACAGAGTGAAGTGGGTTCGTGCTCACCAAGTTTTATCAGGAGCAGATCAGCATGCTGGGTCTGGAGAGCCATTGGGCTTATACCTACCTGTCATGAATGCTCTGTCTAATACAATTAATGATAAACTCCAACAAGATGATGGTAATAGTCAACTTTTTGCTGATCTCCTGCTGACTGTACTATCTAAAATACAAATTCCAGCAATAGCATCAGAGACATGCGCCTTGGGTGCTAAGATACCAGCACGCACGTCTATGGCTGGACCAAGTTATCAACCTCAGTTGTTACTGACACGAGGATCAGAAATCGAAACACATGTTGAGATGGAAAATCCTTCTGGTGAAAGAAAAACTGAGCTGGCCGTGGCCGCTGAGATGCCGGCACTCAAATCTATGACTGGACCAAGTTATGAGCCTCACATGTTGCAGACACAAGTATCAGAAATCAAAGCACTTGTTGAGATGGAAAATTCATGCGGCGTAACAAAATCTGAGCTGGCCATGGCTGCTGAGATACCAGCACCCACATCTATGGTTGGATCAAGTTATGAACCCCAGTTGTTGCAGACAGAAGTATCAGAAATCAAAGCTCATGTTGAGATGGAAAATCCTTTCGGCTAA 1158 0.443 MSSPSVPDSVTRATPKGQPLSEKRSITDDKSASGLNPSNQDGGSGKPKKRNKKNSSQWRMERKRKAEEHFSSMGKEEEEPIPFRIMTRLQKRRLESGLPIFDDRYRITTGLQKSRSESTVTDQTGPSQLNVTDHPKKVEKSEKNKYPTQNIKSLTCEICNTKVMCTNHYQRHMNGRKHLNRVKWVRAHQVLSGADQHAGSGEPLGLYLPVMNALSNTINDKLQQDDGNSQLFADLLLTVLSKIQIPAIASETCALGAKIPARTSMAGPSYQPQLLLTRGSEIETHVEMENPSGERKTELAVAAEMPALKSMTGPSYEPHMLQTQVSEIKALVEMENSCGVTKSELAMAAEIPAPTSMVGSSYEPQLLQTEVSEIKAHVEMENPFG 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00912 385 MobiDBLite consensus disorder prediction 1 21 - -
Spst4g00912 385 SUPERFAMILY beta-beta-alpha zinc fingers 143 187 IPR036236 -
Spst4g00912 385 SMART ZnF_U1_5 151 185 IPR003604 GO:0003676|GO:0008270
Spst4g00912 385 MobiDBLite consensus disorder prediction 1 81 - -
Spst4g00912 385 MobiDBLite consensus disorder prediction 112 145 - -
Spst4g00912 385 Gene3D Classic Zinc Finger 134 190 - -
Spst4g00912 385 MobiDBLite consensus disorder prediction 60 81 - -
Spst4g00912 385 MobiDBLite consensus disorder prediction 30 44 - -
Spst4g00912 385 MobiDBLite consensus disorder prediction 112 131 - -
Spst4g00912 385 Pfam Zinc-finger of C2H2 type 155 178 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00912 - - var:108346504 175.637