Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00879 ATGCAGAAGCAACAACATCAACCCTCCGGTATCATTAACCCTAAGTATTGTGCTCCATATAATGTTGACCTAGCAATTGTGAGAAAGGTCTTGACATTGGCTGATAGCTTTTCCGTCACCGACGTTAATGGCAAAATAGTCTTCAACCTTAGTGCCTCTCTCATGACCCTCCACGACCACCGTCTCTTACTTGACGCCGTCGGCAAACCCATCGTCACACTACTCCGGAAGAAGATGACAACTAATGATCGGTGGCAAGTTTTTCGAGGTGAAAGTACTGAGATGAAGGATTTGATCTTTAGTGTACAGAGATCGTCCCTTTTCCAGCTAAAGACAAAATTGGATGTGTTCTTAGCTAACAATACTAAAGAAAAAGTTTGTGACTTTAAGGTCAAAGGAAGTTGGTTCGAGCGATCTTGTGTTGTTTATGCTGGTGAGTCTCTCACCATTGTTGCCCAGATGCATAAGAAGCACATTCAAAGCATTGCGCTTGGGAAAGATGATTTCGTGGTTACAGTGTATCCAAACATTGACTATGCATTCATAGTGTCCCTGATTCTGATTCTTGACGAAATTAATCAAGACAAGAGACAATCCTAG 600 0.4217 MQKQQHQPSGIINPKYCAPYNVDLAIVRKVLTLADSFSVTDVNGKIVFNLSASLMTLHDHRLLLDAVGKPIVTLLRKKMTTNDRWQVFRGESTEMKDLIFSVQRSSLFQLKTKLDVFLANNTKEKVCDFKVKGSWFERSCVVYAGESLTIVAQMHKKHIQSIALGKDDFVVTVYPNIDYAFIVSLILILDEINQDKRQS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00879 199 Gene3D - 9 199 IPR038595 -
Spst4g00879 199 PANTHER - 23 194 IPR007612 -
Spst4g00879 199 Pfam LURP-one-related 13 188 IPR007612 -
Spst4g00879 199 SUPERFAMILY Tubby C-terminal domain-like 11 193 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00879 Spst-Chr4 36989469 36990666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00879 - - gmx:100527088 340.117