Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00872 ATGTTTGCCTCAGTTGGTGCCCAAACTACCGTAGTGCTTGATGGAAAGTTGATATCCATGGAAATTAGATCAAGAATAGCTGCTAAGGTAAGAAGAATGAAGAAATGCCTAGGAAAAGTTCCTGGATTAGCTGTAATTTTAGTAGGCCAAAGACGGGATTCTCAAACTTATGTTCGCAACAAGATAATGGCCTGTGAAGAAGTTGGAATCAAGTCTTTGGTGACTGAATTACCCAATGATTGTGCAGAAATGGATGTTCAAAATGCCATCATGAGATTTAACAAAGATCCATCCATTCATGGTATCCTTGTGCAACTTCCTCTACCACAATTCATTACGCATCTAGATGAGGAAAAGGTTTTGGATGCTTTATGTCTCGAGAAAGACGTGGATGGTTTTCACCCCGTTAATATGGGGAATCTTGCCATAAGTGGAAGGGAGCCACTTTTTACTCCTTGTACTCCAAAGGGCTGCATTGAGTTATTGATCAGATCAGGAGTCGAGATAATGGGGAAGAAAGCCGTAGTGATTGGAAGAAGTAATATAGTTGGTTTGCCAACGTCCTTGTTATTGCAGAGGCACCATGCAACAGTCACTGTCATACATGCCTTCACAGAAAACCCTGAAAAAATCACCAAAGAAGCTGATATTATAGTTTCAGCGGCTGGAGTGCCTAATTTGGTCCGTGGTAACTGGATAAAACCTGGTGCAACTGTGATCGATGTTGGTACTACTCCTGTTGAGGATCCTGTGTGCGAGGATGGTTATCGTCTCGTAGGCGACGTATGCTACGAAGAAGCCTTGAAAGTGGCATCCGTTATTACTCCTGTGCCTGGCGGGGTTGGTCCTATGACCGTTGCTATGCTCCTATGTAATACTCTAGTTTCTGCAAAAAGAATGCTGAATTTTAATTGA 915 0.4251 MFASVGAQTTVVLDGKLISMEIRSRIAAKVRRMKKCLGKVPGLAVILVGQRRDSQTYVRNKIMACEEVGIKSLVTELPNDCAEMDVQNAIMRFNKDPSIHGILVQLPLPQFITHLDEEKVLDALCLEKDVDGFHPVNMGNLAISGREPLFTPCTPKGCIELLIRSGVEIMGKKAVVIGRSNIVGLPTSLLLQRHHATVTVIHAFTENPEKITKEADIIVSAAGVPNLVRGNWIKPGATVIDVGTTPVEDPVCEDGYRLVGDVCYEEALKVASVITPVPGGVGPMTVAMLLCNTLVSAKRMLNFN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00872 304 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 10 132 IPR046346 -
Spst4g00872 304 CDD NAD_bind_m-THF_DH_Cyclohyd 127 298 IPR020631 GO:0004488
Spst4g00872 304 Gene3D Leucine Dehydrogenase, chain A, domain 1 15 294 - -
Spst4g00872 304 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 9 298 - -
Spst4g00872 304 FunFam C-1-tetrahydrofolate synthase, cytoplasmic, putative 15 157 - -
Spst4g00872 304 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 134 299 IPR020631 GO:0004488
Spst4g00872 304 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 82 109 IPR000672 GO:0004488
Spst4g00872 304 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 167 187 IPR000672 GO:0004488
Spst4g00872 304 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 216 245 IPR000672 GO:0004488
Spst4g00872 304 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 257 273 IPR000672 GO:0004488
Spst4g00872 304 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 41 63 IPR000672 GO:0004488
Spst4g00872 304 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 274 292 IPR000672 GO:0004488
Spst4g00872 304 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 278 286 IPR020867 GO:0003824
Spst4g00872 304 Hamap Bifunctional protein FolD [folD]. 10 301 IPR000672 GO:0004488
Spst4g00872 304 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 13 131 IPR020630 GO:0004488
Spst4g00872 304 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 298 IPR036291 -
Spst4g00872 304 FunFam Bifunctional protein FolD 150 277 - -
Spst4g00872 304 Gene3D - 13 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00872 Spst-Chr4 36826029 36831671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00872 - - gmx:100791604 541.191