Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00868 ATGACGAAGGTACATCCAAACGCAAGCGGTGGTGCATGTGTGAGTGAGGCGGAGAGGTCAAAAAGTATTAGTGGTGGCGACGCAGTGGTCCTCACGGTGTGGAAGAAGTCTCTCTTGCCAAACTGCAATGGATTCACCGTTTTCGACGCTAGAGGGGATCTGGTGTTTAGGGTCGATAACTACATTGCACGGAATAAGCGTCACATACTTCTCATGGACGCTGCCGGCACACCTCTCCTCACCATCCGCCGCAAGAGGCTAAGCTTCGGAGACACCTGGCTCGTGTTTGAGGGAGAGGATGACTCCCTCAAACCACTTTTCACGGCGAGGAAGAATGTCAACATCCTCAACAAGTGTTTGGCCCAAGTCTTCAGCTCTTCCGGAACGGGAACAGGAACTATGAAGAAGGAAGTTGCATATGAGATGGAGGGGTCATACGTCCAACGTTGCTGCACGTTTTACAACAACAATAGGAGAAAAGTTGCAGAGATCAAGATGAAAGAAGCTGCGGCAGGAGGTGTAGCTTTTGGCGCAGACATCTTCCGCCTCATCGTACAGCCTCACATGGACACCGCTCTCGCCATGGCCTTTCTCATCCTCCTTCATCACATGTTTGGATCTCGTTGA 627 0.512 MTKVHPNASGGACVSEAERSKSISGGDAVVLTVWKKSLLPNCNGFTVFDARGDLVFRVDNYIARNKRHILLMDAAGTPLLTIRRKRLSFGDTWLVFEGEDDSLKPLFTARKNVNILNKCLAQVFSSSGTGTGTMKKEVAYEMEGSYVQRCCTFYNNNRRKVAEIKMKEAAAGGVAFGADIFRLIVQPHMDTALAMAFLILLHHMFGSR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00868 208 Gene3D - 23 208 IPR038595 -
Spst4g00868 208 PANTHER - 30 205 IPR007612 -
Spst4g00868 208 Pfam LURP-one-related 25 199 IPR007612 -
Spst4g00868 208 SUPERFAMILY Tubby C-terminal domain-like 25 205 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00868 Spst-Chr4 36493482 36494182 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00868 - - aprc:113850590 283.108