Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00850 ATGGCTGAAAGAGTAGAAGGAGAGTTGCTGAAGGTGGTGGTGTTGGTGTTAATACTAGTGATGTTGGGAGCGAAGACAGAGGCAATGAGCACAACAAGGGGCCATAAAAGGAGTAAAGATGAGTCCTCTGGTTCTGGTGAAGGGGATTCAATGAGCTTTTGTTTGAGTTGGAGATTGGCAGTGGAGGCAAACAACGTGGTTGCATGGCCAACAGTGCCACCTCAGTGTTCCCGATATGTGGAGACTTACATGATCAATGGACAGTACGAACGGGACCTGGATTTGATAGTGGAGGAGATATTGGGATATCTCAACCAAACTTTGCTCCCTCCAGATTCCATGGATGCTTGGATTTTGGATGTTGATGACACTTGCATCTCCAACATCTATTATTACAAAACCAAGAACTATGGGTGTGATCCTTATGACCCATCAGCCTTTAGGAAGTGGGCCATGAAAGGAGGGTGCCCTGCAATTCCTTCCGTACTAAGGCTGTTCAGCATTTTAGTGGACAAAGGATTCAAAGTATTTTTACTGACAGGAAGAGATGAAGAAAGTCTTGGTGAAGTTACCAAGAACAACTTGCACAATCAAGGATTTATTGGCTATGAAAGGCTTATTTTGAGGAATGCAGCATACAGAGGGAAGAGTGCAATGAAATACAAATCTGATGTAAGAAAGCAGTTAGAAGAGGAAGGTTACAGGATATGGGGGAATGTGGGAGACCAGTGGAGCGACATTAAAGGAGATTATTTGGGGAATCGTACTTTCAAACTACCTAATCCTATGTACTTTGTTCCCTAA 804 0.4353 MAERVEGELLKVVVLVLILVMLGAKTEAMSTTRGHKRSKDESSGSGEGDSMSFCLSWRLAVEANNVVAWPTVPPQCSRYVETYMINGQYERDLDLIVEEILGYLNQTLLPPDSMDAWILDVDDTCISNIYYYKTKNYGCDPYDPSAFRKWAMKGGCPAIPSVLRLFSILVDKGFKVFLLTGRDEESLGEVTKNNLHNQGFIGYERLILRNAAYRGKSAMKYKSDVRKQLEEEGYRIWGNVGDQWSDIKGDYLGNRTFKLPNPMYFVP 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00850 267 CDD HAD_VSP 80 266 - -
Spst4g00850 267 SUPERFAMILY HAD-like 107 264 IPR036412 -
Spst4g00850 267 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 15 266 - -
Spst4g00850 267 NCBIfam plant acid phosphatase 50 267 IPR010028 GO:0003993
Spst4g00850 267 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 48 266 IPR005519 -
Spst4g00850 267 PIRSF VSP 7 267 IPR014403 -
Spst4g00850 267 Gene3D - 50 267 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00850 Spst-Chr4 36186022 36187241 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00850 - - gmx:100790842 442.195