Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00847 ATGAAGCAATCGAAGGATCCGTTCGAAGCCGCGTTCGAGGAGTCACCGCCAGAATCTCCGACGGAGACAGAGGGGGAATTAATCCACAACCATAGCCATAACCCTACTCCTTCTCCTTCTCTTCTACCCCTCAATCCACGCCCTCCTCAGAAGCCCACTGCGGTGGTCAAGAACAAAGACAAGGACAAAGACAAAGACAAAGACAAGGACAAAGACAAAGACAAAGACAAGGACAAGGACAAGGACAAAGACAAAGACGATGAGGAGGAGGAAGAAGAAGACAACATGGACGTCGAGCTTGCCAAGCTCCCTTCCACCGGCGACCCTCACAAAATGGCCAAGATGCAGGCAATTTTGTCGCAATTCAGTGAAGAGCAGATGAGTAGATACGAGTCCTTCCGGAGGGCTGGGTTTCAGAGAGCTAATATGAAAAGGTTATTGGCTAGTATCACTGGGACCCAGAAGATTTCAGTGCCAATGACTATTGTAGTATCAGGCATTGCAAAAATGTTTGTTGGTGAAGTTGTTGAAACAGCTAGAATAGTTATGAAAGAGAGGAAGGAATCTGGACCAATTCGGCCTTGTCATTTGAGAGAAGCGTATAGGCGACTAAAACTTGAAGGAAAAGTCTTTAAGAGATCAGCATCGAGGCTCTTCCGGTAA 663 0.4691 MKQSKDPFEAAFEESPPESPTETEGELIHNHSHNPTPSPSLLPLNPRPPQKPTAVVKNKDKDKDKDKDKDKDKDKDKDKDKDKDKDDEEEEEEDNMDVELAKLPSTGDPHKMAKMQAILSQFSEEQMSRYESFRRAGFQRANMKRLLASITGTQKISVPMTIVVSGIAKMFVGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRSASRLFR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00847 220 CDD TAF11 122 205 IPR006809 GO:0005634|GO:0006367
Spst4g00847 220 SUPERFAMILY Histone-fold 122 210 IPR009072 GO:0046982
Spst4g00847 220 MobiDBLite consensus disorder prediction 1 109 - -
Spst4g00847 220 Pfam hTAFII28-like protein conserved region 118 203 IPR006809 GO:0005634|GO:0006367
Spst4g00847 220 Gene3D Histone, subunit A 122 211 IPR009072 GO:0046982
Spst4g00847 220 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED 2 220 IPR045127 GO:0005669|GO:0006367|GO:0051123
Spst4g00847 220 MobiDBLite consensus disorder prediction 54 84 - -
Spst4g00847 220 FunFam Transcription initiation factor TFIID subunit 11 122 211 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00847 K03135 - gmx:100305481 249.98