Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00840 ATGATGACGGCGTTTGAGTCTCACGCGCTTCCTCTCTTACTCTTACTCTTACTAAGTCCGATCAATGCCTCCATCCACGACTACTCCAACGAGCCCTTCACCCACCGCTCCGACGCCTTCTTCTTCCACGGCGGCAGTGAAGCCCTCTTCGCGAAATCCTTCATCAGGTTTGAAACGGTGACGTTTACCCGTCCGCGCGAATCCGCGAGCGGGCACGAGAGAATGCAGCAGAACACGGGTTTAGTGGAGGCCATAGTCCTGGAGGTTCGGGATCGGAATCGGATCGGAGGTTCGTACCTCAAATCCGATTTGATTTGCTGCGATCCGAAGCTGGCGAAGGAGCGGAACTGCAACCTCGGAGAAGTCATCATCCAGAAGAACCCCGACAACCTCGAATTGCCGAAGCGCATCAAAACCTTCTTCCAGGGAACCGAAGAACAGGTCCAGATGGAGACGCAGATCCTCGACATCAACGCCACCGGGATGTACTACCTTTACTTCATGTTCTGCGACCCTTCCCTTAAGGGCACCACCATTAAGGGAAGGACAGTGTGGCGGAACCCTAAAGGGTACCTGCCTGGGAAAATGGCCCCTCTCATGACCCTCTATGGCTTCATGTCTCTGGCCTATCTTTTACTCGGTCTTTGCTGGTTTTTGAGGTTTGTTCAGTTTTGGAAGGACATCATTCACTTGCATTATCATATCACTGCTGTTATTGCGCTTGGAATGTGTGAGATGGCTGTGTGGTATTTCGAGTATGTCAATTTTAACTCCACTGGGACTAGGCCTATGGGTATTACCCTCTGGGCTGTCACCTTTACTTCCGTGAAGAAGACACTGTCACGGCTGCTGCTGTTGGTTGTCTCCATGGGGTATGGGGTTGTTCGCCCCACGCTCGGTGGGAACAGGATTGCCTACAGAGTGCTGCTTCTTGGGATGCTGTATTTTGTTGCCTCTGAGGCACTGGAGCTTGTTGAGCATTTGGGAAACATCAATGACTTCTCTGGGAAGACCAAGCTGATTTTGGTGCTCCCTGTTGTTTGTCTTGACTCGTGCTTCATTCTATGGATTTTCTCATCGTTGTCCAAAACCTTGGAAAAACTTCAGACAAGGAGAAACTTGGCTAAACTGGAGCTCTACCGAAAGTTTACAAACACACTTGCGGTGTCTGTGCTACTGTCCATTGCATGGATTGGCTTTGAGCTATATTTCAATGCTACCGATCCATTGAGTGAGTTGTGGCAAATCGCTTGGATTATTCCAACCTTCTGGTGTCTGCTCTCATATGCTCTCCTGCTGGTGATATGTGTCCTTTGGGCTCCTTCTCGGAACCCTACTAGATATGCATACTTGGAGGAAACGGGAGATGACTTTGATGAGGAGGGTATCTCTCTGACAAGCAGTGTAGCAAAGATAACTGGGGATGTGGCAGCCAAGCTTGATCGGAAGACTGATCTTACCTTTGGAGAAGATCTTGAGGAAGATAAGCGAGAATAA 1497 0.497 MMTAFESHALPLLLLLLLSPINASIHDYSNEPFTHRSDAFFFHGGSEALFAKSFIRFETVTFTRPRESASGHERMQQNTGLVEAIVLEVRDRNRIGGSYLKSDLICCDPKLAKERNCNLGEVIIQKNPDNLELPKRIKTFFQGTEEQVQMETQILDINATGMYYLYFMFCDPSLKGTTIKGRTVWRNPKGYLPGKMAPLMTLYGFMSLAYLLLGLCWFLRFVQFWKDIIHLHYHITAVIALGMCEMAVWYFEYVNFNSTGTRPMGITLWAVTFTSVKKTLSRLLLLVVSMGYGVVRPTLGGNRIAYRVLLLGMLYFVASEALELVEHLGNINDFSGKTKLILVLPVVCLDSCFILWIFSSLSKTLEKLQTRRNLAKLELYRKFTNTLAVSVLLSIAWIGFELYFNATDPLSELWQIAWIIPTFWCLLSYALLLVICVLWAPSRNPTRYAYLEETGDDFDEEGISLTSSVAKITGDVAAKLDRKTDLTFGEDLEEDKRE 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00840 498 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 13 466 IPR009637 GO:0016020
Spst4g00840 498 Pfam Lung seven transmembrane receptor 157 445 IPR009637 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00840 Spst-Chr4 36045460 36048846 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00840 - - gmx:100816334 922.539