Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00800 ATGGCTTCAAGTGGCGTTGCAGCACCAGAGTTCTACCAGAACGTCGTCGTAATGCGTCACGGCGATCGCATGGACAACTTCGAACCGATGTGGGTCGCCACCGCAACCCGACCCTGGGACCCGCCCCTGATCCAACAGGGTCGGGCCCGAGCCTTCGCCACTGGCCGCAGTTTCCGAAAAATCCTACCTTTCACTCTCAACCGTGTCTTCGTCTCTCCCTTTCTCCGATGCGTCCAAACCGCCGCTGAAGTCGTCGTCGCCCTCTCCGCCGTCTGCGACGACGACCGTCCCAACAACCTCACTGGCGATGGCGTCCTCATCGATCCATCTAAAATCAAGGTCTCTGTTGAACATGGCTTGTGTGAAATGATGAGCAGGGCAGCGATCAGACTTGAGGCAGTTCCTAAAGACGGAAACTGGGGATTTGATATACCCGAGATCGAGGCCATGCTTCCGGCAGGAACAGTGGATAAGAATGTGGAAAGGGTCTATAAAACGTTGCCCCAGTGGGAAGAAGATCCAAACTTGCACACAAGGCCTAGATATAAACAAATAGTTAAAGACCTTGCTGACAAATATCATACTGAGAACTTGCTGCTTGTCACACATGGGGAAGGAGTTGGAGTGGCATATTCTTCTTTCGTAAAGGGGGTTGAAGTGTATGAAGTTGATTACTGTGGATACGTCCAACTCAGACGCCCAATTTTCAAGAAAGATCAATCATTCACTGCTGGAGAATTTGAAGCTCTTGTTCACAATGGTCAAACTGGTGTAAAATACACCCAAATCAAAACTGCACAATAA 804 0.5012 MASSGVAAPEFYQNVVVMRHGDRMDNFEPMWVATATRPWDPPLIQQGRARAFATGRSFRKILPFTLNRVFVSPFLRCVQTAAEVVVALSAVCDDDRPNNLTGDGVLIDPSKIKVSVEHGLCEMMSRAAIRLEAVPKDGNWGFDIPEIEAMLPAGTVDKNVERVYKTLPQWEEDPNLHTRPRYKQIVKDLADKYHTENLLLVTHGEGVGVAYSSFVKGVEVYEVDYCGYVQLRRPIFKKDQSFTAGEFEALVHNGQTGVKYTQIKTAQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00800 267 FunFam Phosphoglycerate mutase family protein 11 237 - -
Spst4g00800 267 PIRSF PRIB5 1 267 IPR012398 -
Spst4g00800 267 Gene3D - 12 237 IPR029033 -
Spst4g00800 267 CDD HP 15 84 - -
Spst4g00800 267 Pfam Histidine phosphatase superfamily (branch 1) 16 87 IPR013078 -
Spst4g00800 267 SUPERFAMILY Phosphoglycerate mutase-like 14 228 IPR029033 -
Spst4g00800 267 PANTHER UBIQUITIN-ASSOCIATED AND SH3 DOMAIN-CONTAINING BA-RELATED 11 260 - -
Spst4g00800 267 SMART PGAM_5 14 210 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00800 Spst-Chr4 35056187 35059033 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00800 - - vun:114165971 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00800 4 35056187 35059033 Spst4g00800 4 35056187 35059033 ECH