Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00787 ATGGCAGATGCAGAAGGGTTCGTTGAAGCAGATAATGCAGAGGCCATTATTACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACAGTATAAACCCGTGGAAGCCCTTAAAACTGCGCTTGAAGGAACATATGCCATTATTGGTGATGAGCGTTGCAAGTCAGCACATTGGATTGTTGTGCATAGAGCTATAATGGCTATAAAAGATGTGGATGGGATGCTTTCTTCCTTGGATCCTGAGTACTATGATATTCTAATGAAGTACTTGTATAGAGGCTTAGCCACTGGAGATCGTCCCACATGTGATCAATTTCTTCGGATTCATGAAAAATTGACAGAGAAAGCAGGACATGGTTGCATCCTACGTTTCCTGACTGATACTGTAAATACAGTTTGA 408 0.4118 MADAEGFVEADNAEAIITRIEHKSRKIETLLKQYKPVEALKTALEGTYAIIGDERCKSAHWIVVHRAIMAIKDVDGMLSSLDPEYYDILMKYLYRGLATGDRPTCDQFLRIHEKLTEKAGHGCILRFLTDTVNTV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00787 135 Pfam ARP2/3 complex 16 kDa subunit (p16-Arc) 11 131 IPR006789 GO:0005885|GO:0015629|GO:0034314
Spst4g00787 135 Gene3D - 17 132 IPR036743 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Spst4g00787 135 PANTHER ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC 9 134 IPR006789 GO:0005885|GO:0015629|GO:0034314
Spst4g00787 135 FunFam Actin-related protein 2/3 complex subunit 5 16 132 - -
Spst4g00787 135 SUPERFAMILY Arp2/3 complex 16 kDa subunit ARPC5 8 131 IPR036743 GO:0005885|GO:0015629|GO:0030833|GO:0034314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00787 K05754 - gmx:100809745 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00787 4 34867345 34870681 Spst4g00787 4 34867345 34870681 ECH