Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00774 ATGAAGAAAGTACAAGAGCAGAAAGAGTTAACAAATATGAGTGAAGAGTCGGATTCTAAAGTCGAGGCTATGGATCTCTTACGCCAGTTGGAGGATATTCTTGAATCTGATGCTCTTATTGATGAGCTGGGCTTTATTCATCCATCACAATTTTCCTTGCTTAAGGAAGAATCAGACATTTCGTCTAATTTATTTTATGAAGCTATCCATCAATCAGCAGATGGAGTAGTAAGCTCAGTGGAATCTTCCAACCAAGACAGCCTATATTTCTGGAACAGAGATCATAAATTGGGAATATCAACTCATGTTCTTCTACCGTTATATAGAACTGCTAAACATGCATTCATGACTACATTTAAACAATACAGAATGTGTGACAACCAATATGACAAAGTTGGAATTTGTTTACCCACCGCTTCTTCTTGTGATAATCTTGAAAGTACACTTCTGAGACACAGCAAGTCTCTTCTGCTGCTAAGCTGTGATTTTATCACAGCTTGGAATTGCAGAAAATTAATAGTGTCCAAAAAGCAGCAGCTCTCAATGTTTATGGATGAACTTCTCCTGTCAGAACTTGTACTCTCATATTCACACAAAAGTGAACAAGCTTGGAACCATAGGCGATGGGTGATCAAGTCAATCTCTGCAAACTGTTCAAATTTCAAAGAGATATTGGGAAAAGAATCTGAGCTGGTGGAAAAAATAGCTGAGAGATCAAAAATGAATTATCGTGCATGGAATCACCGTTGCTGGTTAGTCTCACACATGACCGTTGACCAGGTTCTATGCGAGTTAAAGAAATCAAGAAGTTGGGCCGCATTGCATGTTACTGATAATTGTTGTTTCCACTATCGCAGACGACTATTACTGAAAATTATGGAGGGCCAAAGTTGTGTGGAAGATACTGTAACTCATGGTTATAATGTTAATATAGTCCAAGCCTTGAAGGACGAGCTTGATTGGAATGAAACATTGATAAAACGTTACGTTGGAAGGGAGGCTCTATGGCTTCATCGGCGCTTCCTTTCCATGTGCTGGATAAATAATTTTGTACTTGCTGCTGGTGATGCATCCTACCATTCCAAGGAGGCAATCAGCCTGTATCATGACTTTGGCACCTTTCTGCAGAATGAATTGTGTCTTCTCCACTCCTGCTCAACTATTGTTGATGATGATTTTGTGGATGTCCAAGCACAAGCTGCACATTCTGCTAGTTACATTCTCTGGTTGAAAGTGCAAGTCCCCAAGCCTCTGGAGAATGAGCTCCAAGAGAAGATAAGAGATGTGGATCTGAAGACCTTGCTGAATAAGTCATGCCCAGTGAGATCCTCACTGTTCAATTACTTTATGAACTAG 1356 0.399 MKKVQEQKELTNMSEESDSKVEAMDLLRQLEDILESDALIDELGFIHPSQFSLLKEESDISSNLFYEAIHQSADGVVSSVESSNQDSLYFWNRDHKLGISTHVLLPLYRTAKHAFMTTFKQYRMCDNQYDKVGICLPTASSCDNLESTLLRHSKSLLLLSCDFITAWNCRKLIVSKKQQLSMFMDELLLSELVLSYSHKSEQAWNHRRWVIKSISANCSNFKEILGKESELVEKIAERSKMNYRAWNHRCWLVSHMTVDQVLCELKKSRSWAALHVTDNCCFHYRRRLLLKIMEGQSCVEDTVTHGYNVNIVQALKDELDWNETLIKRYVGREALWLHRRFLSMCWINNFVLAAGDASYHSKEAISLYHDFGTFLQNELCLLHSCSTIVDDDFVDVQAQAAHSASYILWLKVQVPKPLENELQEKIRDVDLKTLLNKSCPVRSSLFNYFMN 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00774 451 FunFam Protein prenyltransferase alpha subunit repeat-containing protein 1-B isoform D 118 429 - -
Spst4g00774 451 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 182 216 IPR002088 GO:0008318|GO:0018342
Spst4g00774 451 Gene3D Protein prenylyltransferase 120 369 - -
Spst4g00774 451 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 41 448 - -
Spst4g00774 451 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 224 258 IPR002088 GO:0008318|GO:0018342
Spst4g00774 451 Pfam Protein prenyltransferase alpha subunit repeat 315 342 IPR002088 GO:0008318|GO:0018342
Spst4g00774 451 Pfam Protein prenyltransferase alpha subunit repeat 185 212 IPR002088 GO:0008318|GO:0018342
Spst4g00774 451 Pfam Protein prenyltransferase alpha subunit repeat 228 256 IPR002088 GO:0008318|GO:0018342
Spst4g00774 451 SUPERFAMILY Protein prenylyltransferase 148 349 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00774 K14137 - gmx:100807426 748.814