Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00757 ATGGGAATCCTGGCTTTGCCCTTAGTCATCTCCCTTCTCAAACCCCACGCCACAACTCGCCTCCGCCCCTCCCACTCCCTTTTCCTCCGCCGCCGCCACTTTGCCACGACCTTCTCCGCCACCACTACTCCTCATTCTCATTCTCATTCTCCTTCACCTTCACATTCTCTGTCACGCCACTCTTCTACTTCAACTCAATCCGACAATCGTTCCGTTAACTCCTCAACCCTCACCTTCCAGCAAGCCATTCAGCGCCTTCAGGAATATTGGGCTTCTGTTGGGTGTTCTATAATGCAATGTAGCAACACAGAGGTTGGAGCTGGGACTATGAATCCTCTTACATATTTAAGGGTTCTTGGCCCTGAACCATGGAATGTTGCGTATGTGGAACCTAGCATCCGCCCTGATGATAGTCGATATGGAGAAAACCCAAATAGGCTCCAGAGACATACTCAATTTCAGGTGATACTGAAGCCGGATCCTGGAAATTCTCAGGATCTATTTATCCGCAGCCTCTCTGCTTTAGGTATTGATGTTACTGCACATGATATACGATTTGTGGAAGATAACTGGGAGAGTCCGGTTCTTGGTGCTTGGGGTTTGGGCTGGGAAATTTGGATGGATGGGATGGAGATTACGCAATTCACTTACTTTCAGCAGGCTGGAAGTCTCCAGTTATCACCTGTATCTGTAGAAATTACTTATGGCCTTGAGCGTATCCTCATGTTACTGCAGGGGGTTGATCACTTCAAGAAGATAAAATATTCTGATGGAATTACATATGGAGAGTTGTTCTTGGAGAATGAGAAGGAAATGAGTGCATATTACTTGGAGCACGCTAGTTTTGATCACGTTCAAAAACATTTTGATTTCTTTGAGGAGGAAGCTCGTAGCTTACTTGCTTCTGGCCTTACAATCCCTGCGTATGATCAGCTTCTGAAAACATCTCATGCTTTTAATATCTTAGACTCCAGAGGCTTTGTTGGTGTAACAGAGCGTGCTCGTTATTTTGGTCGCATGCGTAGGGATCAAGTCTTGGCTCATCAGCTTGAAGTTTGTCATATTCCCATTCTGGATCAGTGGGCTGATGCTTTTACCAAGCCTCTCTCTCCTACTCGCTTCCAGCTTCTTCGGTCCAAACTCAGTTTGGGTTTAGCTCGCCAGTGTGCTCAACTTTGGTTGAAGACAAGAGAGATGCTTGGCTTTCCCCTTGGTTTTATCTCTGAACCTGATCATTTTGTATTGCCAAAAGGAATTTTGGAAGCTGCATGTGCGAAGGATCATTTTTTGCTTTGGTCCTTCACCTTGAATTCTAAGCTTATAGGGTCCGAAGGGGCAATTGGCATGAGTTCTTTGTCAGATATTGTTAGGTATGTGATTGAGCTTAGTGTCGGGGAGGGTGATATGGTGCATGATCATTCAAGAGCATTTGTTCTTGAAATTGGGACTGAAGAGATGCCGCCTCAAGATGTCATTGATGCCAGTAATCAACTGAAAGACTTAATGATGCAACTACTTGAACGGCAAAGGTTAAACCATGGTGCAGTTCAAGCATTTGGCACCCCACGGAGATTAGTGGTTGCTGTTGAGAATCTATACGCAAAACAGGCTGAAAAGGAGGTTGAAGTTCGAGGTCCTCCAGTTTCAAAAGCATTTGATCATGAAGGAAATCCAACAAAGGCCATTGAGGGTTTTTCTCGTAGATACTCTGTTCCACTGGACTTGGTATACAGAAAGGTTGATGGTGCGTATTCAGAAGCAGAAAGACTTGTTGAGCTCAGTCCTTCAATAGGTACTTCAATTCAGTTTCCTGATGTTGCAGGGAAAACAGAATATGTTTATGCACGAATAAAGGAGTCTTCAAGACATGCTTTGGAGGTCTTGTCTGAAGATTTGCCTGCTACCATTGCCAAAATTTCATTTCCAAAGACAATGCGTTGGAATTCTCAGGTGATGTTTAGCAGGCCTATTCGATGGATTTTAGCCTTGCATGGAGATGTAGTAGTCCCATTTATGTTTGCTGGGGTGACAAGTGGAAACTTGTCTTGTGGTCTTCGTAATACTTCTTCAGCTGTTGTCCAGGTGGAAAGTGCAGAATCTTATTCAGTTACAATGAAAAATGTGGGAATCGATGTTTCAGTCGAGGACCGTAAGAAAATTATTTTTGAGCAATCAAATGCATTGGCAAAAAGTGTAAATGGTCAAATTCTTATACCAAAAGGTTTGCTTGATGAGGTTGTAAATCTTGTTGAGGCACCTTTTCCCGTGCTTGGAAAGTTTAAAGAAACCTTCTTAGATCTTCCGAAAGATCTTTTGACCATGGTAATGCAAAAGCATCAAAAGTATTTTGCTGTATGCGATGCAAATGGACAGTTATTGCCTTATTTCATTGCTGGATTTTCTCAGGTTGCAAATGGATCAATTGATGAGACTACGGTAAGGAAAGGAAATGAAGCTGTGCTCAGGGCTCGCTATGAAGATGCGAAATTCTTTTATGAGATGGACACTCGTAAAAAGTTTTCAGAATTTCGAAAGCAACTTAAAAACATTCTCTTTCACGAGAAGCTTGGGACCATGCTTGATAAGATGACTCGTGTTGAAAACATGCTTACCGAACTAAGTTGCATCCTAGATATCAATGGAGATGTTCAACAAATTATCCGAGATGCTGCCTCACTTGCAATGTCTGATCTTTCCACTGCAGTTGTCACTGAATTTACCTCACTTTCGGGAATCATGGGGCGTCACTATGCCCTTAGAAACGGATACTCTGAGCAGATTGCAGAGGCATTGTTTGAGATCACGCTTCCTAGATTTTCTGGGGACTTGCTTCCTGAAAGTGATGCTGGCACAGTTTTGGCAATTGCTGATAGATTAGATAGCCTGGTAGGTTTATTTACTGCTGGTTGTCAACCGAGTTCCACAAATGATCCGTTTGGTCTGCGAAGAATCTCATATGGTCTTGTGCAACTATTTGTGGAAAAGAATAAAACTCTAGATTTTAAAAAGGCCCTGGAACTTGCTGCAGAAGTCCAGCCCATTAAAGTAGATTCTCATGTAATTGATGATGTACATCAATTTGTTACTCGAAGATTAGAGCAATTTCTGGTTGACAAGGGGGTGCGTGCAGAATTTGTTCGGTCAATCCTTGTAGAAAGAGCAAATCTTCCTTGTCTGGCAGCAAAATCAGCATACAAAATGGAAGAATTGTCAAGAGGGAAACTTTTTCCCAAAGTTGTTGAAGCATACTCCCGGCCAACTAGAATTGTCCGTGGGAAGGAAGATGAACTCCAGACGGAGGTGGATGAGGCTGCTTTTGTGACAGATGAAGAGCGCGTTTTATGGAACACGTTTTTGTCTGTTAAAAAGAGTATCAATCCTGGTCTTGACATAGATGATTTTGTAGAAACTTCATGTCAGTTAATACAGCCACTTGAGGATTTCTTTAATAATGTCTTTGTAATGGTGGACGATGACAAGATCAGAGTAAACAGGTTAACCCTGTTAAAAGGAATTGCTGACCTCCCTAAAGGAATAGCAGACCTTACTGTTCTACCAGGATTTTAA 3567 0.4264 MGILALPLVISLLKPHATTRLRPSHSLFLRRRHFATTFSATTTPHSHSHSPSPSHSLSRHSSTSTQSDNRSVNSSTLTFQQAIQRLQEYWASVGCSIMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPVSVEITYGLERILMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHASFDHVQKHFDFFEEEARSLLASGLTIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRRDQVLAHQLEVCHIPILDQWADAFTKPLSPTRFQLLRSKLSLGLARQCAQLWLKTREMLGFPLGFISEPDHFVLPKGILEAACAKDHFLLWSFTLNSKLIGSEGAIGMSSLSDIVRYVIELSVGEGDMVHDHSRAFVLEIGTEEMPPQDVIDASNQLKDLMMQLLERQRLNHGAVQAFGTPRRLVVAVENLYAKQAEKEVEVRGPPVSKAFDHEGNPTKAIEGFSRRYSVPLDLVYRKVDGAYSEAERLVELSPSIGTSIQFPDVAGKTEYVYARIKESSRHALEVLSEDLPATIAKISFPKTMRWNSQVMFSRPIRWILALHGDVVVPFMFAGVTSGNLSCGLRNTSSAVVQVESAESYSVTMKNVGIDVSVEDRKKIIFEQSNALAKSVNGQILIPKGLLDEVVNLVEAPFPVLGKFKETFLDLPKDLLTMVMQKHQKYFAVCDANGQLLPYFIAGFSQVANGSIDETTVRKGNEAVLRARYEDAKFFYEMDTRKKFSEFRKQLKNILFHEKLGTMLDKMTRVENMLTELSCILDINGDVQQIIRDAASLAMSDLSTAVVTEFTSLSGIMGRHYALRNGYSEQIAEALFEITLPRFSGDLLPESDAGTVLAIADRLDSLVGLFTAGCQPSSTNDPFGLRRISYGLVQLFVEKNKTLDFKKALELAAEVQPIKVDSHVIDDVHQFVTRRLEQFLVDKGVRAEFVRSILVERANLPCLAAKSAYKMEELSRGKLFPKVVEAYSRPTRIVRGKEDELQTEVDEAAFVTDEERVLWNTFLSVKKSINPGLDIDDFVETSCQLIQPLEDFFNNVFVMVDDDKIRVNRLTLLKGIADLPKGIADLTVLPGF 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00757 1188 SUPERFAMILY Class II aaRS and biotin synthetases 78 342 IPR045864 -
Spst4g00757 1188 Pfam Glycyl-tRNA synthetase alpha subunit 79 342 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 NCBIfam glycine--tRNA ligase subunit alpha 78 342 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 MobiDBLite consensus disorder prediction 39 73 - -
Spst4g00757 1188 PRINTS Glycyl-tRNA synthetase alpha subunit signature 232 247 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 PRINTS Glycyl-tRNA synthetase alpha subunit signature 152 172 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 PRINTS Glycyl-tRNA synthetase alpha subunit signature 183 207 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 PRINTS Glycyl-tRNA synthetase alpha subunit signature 317 333 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 PRINTS Glycyl-tRNA synthetase alpha subunit signature 131 146 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 PRINTS Glycyl-tRNA synthetase alpha subunit signature 209 229 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 858 1150 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 Gene3D Class II aaRS and biotin synthetases; domain 2 281 350 - -
Spst4g00757 1188 CDD GlyRS_alpha_core 78 398 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 NCBIfam glycine--tRNA ligase subunit beta 477 1184 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 Hamap Glycine--tRNA ligase beta subunit [glyS]. 474 1185 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 FunFam Glycine--tRNA ligase alpha subunit 71 280 - -
Spst4g00757 1188 Pfam Glycyl-tRNA synthetase beta subunit 477 1050 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 Gene3D Bira Bifunctional Protein; Domain 2 63 280 IPR045864 -
Spst4g00757 1188 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 78 341 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 Hamap Glycine--tRNA ligase alpha subunit [glyQ]. 77 357 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 PANTHER GLYCYL-TRNA SYNTHETASE 606 1186 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Spst4g00757 1188 SUPERFAMILY HD-domain/PDEase-like 834 987 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00757 K14164 - gmx:100787365 1825.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00757 4 34365985 34405865 Spst4g00757 4 34365985 34405865 ECH