Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00751 ATGACTAAACCAGTTGCAGCTTCTTTCTTGGTTCTGATGTTGGCTTTTCCCACTGTATTTGGAGTTGACTATGATGTTGGTGACAGCAGTGGATGGATTACACAGTTTAATTACGACAACTGGGCCTCTGGGAAAACTTTCAGAGTTGGTGACAATTTGGTGTTCAAGTATGACTCGAGCCATGAAGTGGATGAGGTTGATGAGAGTAGCTACAACAGCTGCAGTTCAAGCAACACCATCAAGAATTACAATGATGGAAACAGCAAAGTTGCATTGACTGCAACCGGGAAAAGGTTCTTCCTGTGCCCCAGGACAGGGCACTGTGCTGGAGGCATGAAGTTGCAGATCAATGTGGTGGCTGCCAGCACCACCACCCCTTCAAGTGGCACCACCCCTCCAACCACCACCACCCCATCAACCCCTTCTTCTCCTCCCTCTGGGTCAGGCTCCCCTCCAACCTCCAACACCACCTCACCATCACCAAAACCTAATGGAGCAGTTGGGGCTTCCAGTGGCATTGGTCTTCTGGTGGCTGCTTCAGCACTTGTGCTTGCTTTCATGGGCTAG 567 0.5026 MTKPVAASFLVLMLAFPTVFGVDYDVGDSSGWITQFNYDNWASGKTFRVGDNLVFKYDSSHEVDEVDESSYNSCSSSNTIKNYNDGNSKVALTATGKRFFLCPRTGHCAGGMKLQINVVAASTTTPSSGTTPPTTTTPSTPSSPPSGSGSPPTSNTTSPSPKPNGAVGASSGIGLLVAASALVLAFMG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00751 188 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Spst4g00751 188 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
Spst4g00751 188 MobiDBLite consensus disorder prediction 123 167 - -
Spst4g00751 188 FunFam Blue copper 20 124 - -
Spst4g00751 188 PANTHER BLUE COPPER PROTEIN 21 132 IPR039391 GO:0009055
Spst4g00751 188 CDD Phytocyanin 22 118 - -
Spst4g00751 188 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Spst4g00751 188 Gene3D - 21 125 IPR008972 -
Spst4g00751 188 MobiDBLite consensus disorder prediction 149 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00751 Spst-Chr4 34054296 34055157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00751 17 121 Miscellaneous Gene Families AT3G60280 49.524 6.24e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00751 - - gmx:100803164 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00751 4 34054296 34055157 Spst4g00751 4 34054296 34055157 ECH