Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00749 ATGGCTCATTTGCTTCTCTTTGTTTTGGTGTTTGCTGCTCAACTGATTGCTCGATTCAATACCCAAAAACTACCAACATCCCACTTTGGAAGTATGATAACTATCCTGAGCATTGATGGTGGTGGTATATTAAGGGGATTATTCCAGCAACAGTTCTTAGCAAAGGATCCAAATGCAGATTTAGCACATTATTTTGACGTGATAGGAGGGACAAGCACGGGTGGACTCATAACAGCTATGTTAGCTGCCCCAAGCCCTGATGACCCTAGTCGTGCTGCCTTTACTCCTGCACAAATTGTAGACTTATACATTGAAGATGGCCCTCATATATTCAATACATCTAATCCTGGAGAAGGTCCCATATTCGATGGTCAATATTTGCATAACATAACACGTGAACTGTTGAAGGACACACGACTTAATCAAACATTGACAAAAGTTGTAATCCCAACTTTCGACCTCAAGAGACAAAAGGCAGTTCTATTCTCAAGCTACAAGCTTGAGAGTGCTCCCTACTTAAATGCCTTGTTGTCTGATATATGCATATCAACTTCAGCTGCACCCGTGTATCTGCCACCCTACTATTTTGTGAATGATGGTGTTGAGTTCAATATGATTGATGGTGGTGCAACAGCTGGGAATCCGTGTTGTCTAGGGACTGGAACCACGAATATTAAAGAGATCTATGATGTTCAAATGGCTGCCACATGGAACCTTCTGGACTGGATTACTAAAGGAATAGGTCTTCTCGGTGGTGGTTCAACAACCATGATTGAATTGTACCTTGCTTCACTCTTCTTAGGCTTCCAACATGACAATACCTACCTTCGAATTGAG 837 0.4194 MAHLLLFVLVFAAQLIARFNTQKLPTSHFGSMITILSIDGGGILRGLFQQQFLAKDPNADLAHYFDVIGGTSTGGLITAMLAAPSPDDPSRAAFTPAQIVDLYIEDGPHIFNTSNPGEGPIFDGQYLHNITRELLKDTRLNQTLTKVVIPTFDLKRQKAVLFSSYKLESAPYLNALLSDICISTSAAPVYLPPYYFVNDGVEFNMIDGGATAGNPCCLGTGTTNIKEIYDVQMAATWNLLDWITKGIGLLGGGSTTMIELYLASLFLGFQHDNTYLRIE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00749 279 Gene3D Cytosolic phospholipase A2 catalytic domain 21 279 - -
Spst4g00749 279 Pfam Patatin-like phospholipase 36 215 IPR002641 GO:0006629
Spst4g00749 279 SUPERFAMILY FabD/lysophospholipase-like 31 278 IPR016035 -
Spst4g00749 279 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 220 IPR002641 GO:0006629
Spst4g00749 279 PANTHER XYLOSE ISOMERASE 218 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00749 Spst-Chr4 33956138 33960387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00749 30 279 Acyl Lipid Metabolism Gene Families AT4G37070 37.954 5.29e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00749 - - vun:114165690 359.377