Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00748 ATGGCTCATTTGCTTCTCTTTGTATTGGTGTTTGCGGCTCAACTGATTGCTGGATTCAGTACCCAAAAACTACCAACATCCCACTCTGGAAGCATGATAACTATCCTGAGCATTGATGGTGGTGGTATCAAGGGGATTATTCCAGCAACAGTTCTTAATTACTTGGATAAGGCTCTCAAGGCAAAGGATCCAAATGCAGATTTAGCACATTATTTTGACGTGATAGGAGGGACAAGCACGGGTGGACTCATAACAGCTATGTTAGCTGCCCCAAGCCCTGATGACCCTAGTCGTGCTGCCTTTACTCCTGCACAAATTGTAGACTTCTACGTAGAAGATGGCCCTCATATATTCAATACATCTAATCCTGGAGACGGTCCCATATTCGATGGTCAGTATTTACATAACATAACACGTGAACTGTTGAAGGACACACGACTTAATCAAACATTGACAAAAGTTGTAATCCCAACTTTCGACCTCAAGAGACAAAAGCCAGTTATATTTTCAAGCTACAAGCTTGAGAGTGCTCCCTACTTAAATGCCTTGTTGTCTGATATATGCATATCAACTTCAGCTGCACCCGTGTATCTGCCACCCTACTATTTTGTGAATGATGGTGTTGAGTTCAATATGATTGATGGTGGTGCAGCAGCTGGGAATCCGACACAAGCTACGGTGAGTGAAGTGTTACAACACAATAAGTATCCCAAAATCCTAGTGTTGTCTTTAGGGACTGGAACAACGAAAATTGAGGAGATCTATGATGTTCAAATGGCTGCCACATGGAACCTTCTAGACTGGATTACTAAAGGAATAGGTCTTCTTGGTGGTGGTTCAACAGCCATGACTGAATTGTACCTTGCTTCACTCTTCTTAGGCTTCCAACCTGGCAATACCTACCTTCGAATTGAGGAATATAACTTGGATCCTGCTTTCACCGACATGGCTAATGTTACAAAAGAAAACTTGAAGGGTCTTAGTGACACTGGAATAAATCTGTTAAAAGAAAAAGTTGTGAGGATGAATTTGGATACTTTTAATTTTGAAGACGCAGGGGAAGGAACAAATGCTGAGGCTCTTGACAGGTTGGCTGAGATTTTGTATGAAGAAAGACAGGATCGTCTGAAACGAAAGTCTACTGAAAGAGGAGGAAGACCATTTCTTGAAACTCTTAGGGTTCCTTCAGACAAAACCCTAGCTAATTGGGCATTTCTAAATAACATATTTATATAA 1236 0.4134 MAHLLLFVLVFAAQLIAGFSTQKLPTSHSGSMITILSIDGGGIKGIIPATVLNYLDKALKAKDPNADLAHYFDVIGGTSTGGLITAMLAAPSPDDPSRAAFTPAQIVDFYVEDGPHIFNTSNPGDGPIFDGQYLHNITRELLKDTRLNQTLTKVVIPTFDLKRQKPVIFSSYKLESAPYLNALLSDICISTSAAPVYLPPYYFVNDGVEFNMIDGGAAAGNPTQATVSEVLQHNKYPKILVLSLGTGTTKIEEIYDVQMAATWNLLDWITKGIGLLGGGSTAMTELYLASLFLGFQPGNTYLRIEEYNLDPAFTDMANVTKENLKGLSDTGINLLKEKVVRMNLDTFNFEDAGEGTNAEALDRLAEILYEERQDRLKRKSTERGGRPFLETLRVPSDKTLANWAFLNNIFI 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00748 411 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 227 IPR002641 GO:0006629
Spst4g00748 411 SUPERFAMILY FabD/lysophospholipase-like 32 346 IPR016035 -
Spst4g00748 411 Gene3D Cytosolic phospholipase A2 catalytic domain 21 381 - -
Spst4g00748 411 Pfam Patatin-like phospholipase 36 225 IPR002641 GO:0006629
Spst4g00748 411 PANTHER XYLOSE ISOMERASE 22 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00748 Spst-Chr4 33852599 33854451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00748 30 375 Miscellaneous Gene Families AT2G26560 44.186 7.05e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00748 - - vun:114165690 597.816