Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00744 ATGGCTCCAATCCTCTTGTTTACTCTGGTGTTTGCTACCCAACTGATGGCTGGATTGAGTTCACCGCCGCCACCATTACCACCTCCGTCGTACGGAAACCGAACATCCATTCTGAGCATAGACGGTGGTGGTATCCGGGGCATTATTCCAGCAACTGTTCTTGAATACTTAGAAAACGCTCTTAAGAAAAAGGACCCAGACACATCATTAGCACATTATTTTGATGTGATGTCAGGAACAAGCACTGGTGGACTCATGGCTACCATGTTAGCAGCCCCAAACCCATCTGACTCCAATCATCCTCTCTTTACTTCTTCGCAAATCGTACGATTCTACAAGACGTATGGCCCTAAAATATTTGAACCAAGATTCTTTCCATCATGTCCCAAGTATAATGGGAAGTTCCTACCTTATTTGATTGATTCGATACTGAAAGAAACACGACTGAACCAAACATTGACAAACATAGTAATACCAACTTTCGACCAGAGGAGAGTCATGCCTGTTATATTCTCGAACTTTAAGCTGAAAACAGAAACTTATCTGAATGCGAAACTCTCAGATATATGCCTCGGAACTTCGGCTGCACCAACTTATCTGCCATCCCACAAATTTAAGAATGAGGGTGTTTACTTTAATTTGGTCGATGGTGCTATGGCTGCTAATAACCCAGCAGTGGTTGCTGTGAGCGAAGTGATACAACACAGTGAGAGAAAGGACATGATAATGCTATCGTTAGGAACTGGAATTGTAAAACCACCTCTTCAGATGGTAAGGGGGTTCTTTGAAGAAGCGTGTGAACTTTATTGGACAATCACTCACAGTGGAGTTATCAGTGAGGCTTTGTTTAGTACAGACATCACCCATTATTACCTTGCCACTGTCTTCCCTGGCCTCTTGCCTCCTGAAAACTACCTTCGCATTCAGGAGTATAGCCTGAATCCATCCTTGGAACCATTGGATAATGCTGATGAAAAGAACATGAATAAACTTGAAAAGGTAGGAGATGGTCTGTTGCAACAAAAGGTTAAGAGGATGAATGTGAATACTTTTGTCCCAGTTGAACTAGACCATACAAATGCTCAAGCTCTTGACAGCTTTGCTGAGAAATTATATGAAGAGAGGCAGTTACGTCTGAAGAGGAAATCTATAGCAAAGGGAAGAAGACCATCTATTGAAAATGTCAAAGTCCCTTCTGGGGAAATCAGAGTCATTTGA 1218 0.4228 MAPILLFTLVFATQLMAGLSSPPPPLPPPSYGNRTSILSIDGGGIRGIIPATVLEYLENALKKKDPDTSLAHYFDVMSGTSTGGLMATMLAAPNPSDSNHPLFTSSQIVRFYKTYGPKIFEPRFFPSCPKYNGKFLPYLIDSILKETRLNQTLTNIVIPTFDQRRVMPVIFSNFKLKTETYLNAKLSDICLGTSAAPTYLPSHKFKNEGVYFNLVDGAMAANNPAVVAVSEVIQHSERKDMIMLSLGTGIVKPPLQMVRGFFEEACELYWTITHSGVISEALFSTDITHYYLATVFPGLLPPENYLRIQEYSLNPSLEPLDNADEKNMNKLEKVGDGLLQQKVKRMNVNTFVPVELDHTNAQALDSFAEKLYEERQLRLKRKSIAKGRRPSIENVKVPSGEIRVI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00744 405 PANTHER XYLOSE ISOMERASE 28 379 - -
Spst4g00744 405 Pfam Patatin-like phospholipase 38 228 IPR002641 GO:0006629
Spst4g00744 405 Gene3D Cytosolic phospholipase A2 catalytic domain 29 384 - -
Spst4g00744 405 SUPERFAMILY FabD/lysophospholipase-like 34 357 IPR016035 -
Spst4g00744 405 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 38 229 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00744 Spst-Chr4 33652272 33655299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00744 19 387 Miscellaneous Gene Families AT2G26560 40.887 3.88e-86 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00744 - - gmx:100802647 549.28