Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00743 ATGGCTACACTGCTCTTGTTTGCTTTGGTGTTTTCTAGCCAGCTTATGGCTGGAATCACTGCATCACCATCATCTTTACCACCACCATCTTATGGAAACCGTACATCCGTTCTGAGCATAGACGGTGGTGGCATCAGAGGCATTATTCCTGCAACAGTTCTTGAATACTTAGACAATGCTCTTAAGGCTAAGGATCCAACAACATCATTGGCACATTATTTTGATGTGATATCAGGAACAAGCACTGGTGGACTCATGACTGCTATGTTAGCAGCGCCAACCTCACCTCACTCCAAGCATCCTCTCTTTAATCCCTCCCAAGTCCTACAATTCTACAAGAAATATGGTCCTGAAATATTTAAACCTAGAGCATGGTATGATCCTGAAAAATGTCCCAAGTATGATGGAGTGTTCTTACGAGATATAACTGGAAAGTTATTGAAGGACACAAGACTGAATCAAACATTGACGAACGTGGTAATAACATCCTTCGACGAGAGGAAAATCAAGCCAGTTATATTCTCAAACTTTAAGTTGAAGACAGCAACTTATTTGAATGCGAAACTCTCAGATATAGCCCTCGCAACTTCGGCTGCACCAACTTATCTTCCATCTCACCAATTTGAGAATGATGGTGTTGAATTTGATTTGCTGGATGGTGCTATGGCTGCTAATAATCCAGCTGTGGTTGCTGTGAGTGAAGTGATACAACACAGTGAGAATAAAGAAATCCTGTTGCTGTCGTTAGGAACTGGAACAACACAGAAGAACAAGTTAACTGGCATCTTTGATGTTGTGTGTCAAGTTGGATGGCTAATAAACAGCATTGACGTTGTTAGTGAGGCTCTTTATAGTACAAACATGATCCATTACTACCTTGCAACAGTCTTCCCTGGCCTCTTGCCTCCAGATAACTATCTTCGAATTGAGGAGTATAACCTGGATCCATCTCTAGGAGAAATGGATAATGCTGATCCAAAAAACATGGAAGAACTTGAAGAGGTAGGAAAAAACCTGTTGCAGGAAAATGTTTCGAGGATAAACATCAACACTTTTATCCCATATGAAATAGACCAAACAAATGCTGAAGCTCTTGACAGGTTGGCTGAGAAATTATATGCAGAGAGACAGTTGCGTCTGAAAAGGAAATCTATGGCAAACGAAGGAAGCCCTTTTATTGAAACTGTGAAAATTTCTTCTGCAGAACTCCATGCAGCTTAA 1221 0.4087 MATLLLFALVFSSQLMAGITASPSSLPPPSYGNRTSVLSIDGGGIRGIIPATVLEYLDNALKAKDPTTSLAHYFDVISGTSTGGLMTAMLAAPTSPHSKHPLFNPSQVLQFYKKYGPEIFKPRAWYDPEKCPKYDGVFLRDITGKLLKDTRLNQTLTNVVITSFDERKIKPVIFSNFKLKTATYLNAKLSDIALATSAAPTYLPSHQFENDGVEFDLLDGAMAANNPAVVAVSEVIQHSENKEILLLSLGTGTTQKNKLTGIFDVVCQVGWLINSIDVVSEALYSTNMIHYYLATVFPGLLPPDNYLRIEEYNLDPSLGEMDNADPKNMEELEEVGKNLLQENVSRININTFIPYEIDQTNAEALDRLAEKLYAERQLRLKRKSMANEGSPFIETVKISSAELHAA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00743 406 Pfam Patatin-like phospholipase 38 231 IPR002641 GO:0006629
Spst4g00743 406 FunFam Patatin 28 385 - -
Spst4g00743 406 SUPERFAMILY FabD/lysophospholipase-like 34 358 IPR016035 -
Spst4g00743 406 Gene3D Cytosolic phospholipase A2 catalytic domain 29 385 - -
Spst4g00743 406 PANTHER XYLOSE ISOMERASE 23 380 - -
Spst4g00743 406 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 38 232 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00743 Spst-Chr4 33451743 33455264 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00743 22 386 Miscellaneous Gene Families AT2G26560 39.655 3.44e-78 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00743 - - gmx:100802647 607.831