Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00741 ATGGCTCATTTGCTTCTTGTTGTTTTGCTGTTTTCTGCTCAACTGATTTCTGGATTCAGTATCCAAAAACTACCTCCATCAGACTATGGAAACGTGATAACTATTTTGAGTATTGATGGTGGTGGTATTAAGGGGATTATTCCAGCAACAGTTCTTAATTACTTGGATAAGGCTCTTAAGGCTAAGGATCCGGATGCAGATTTAGCACATTATTTTGACGTGATAGGAGGGACAAGCACTGGTGGACTCATAACAGCTATGTTAGCTGCCCCAAGCACTGAAGACCCCAATCATGCCGCCTTTACTCCTGCACAAATTGTAGACTTCTACATAAACGAAGGCCCTTCTATATTCAACACATCTAACCCTGGAAAAGGTCCCCAATTTGATGGGAAGTTCTTACATAACATAACTCGTGAGAAGTTGAAGGACACAAGACTTAGTCAAACATTGACCAACGTTGTAATTCCAACTTTCGACCTCAAGAGACAAAAGCCAGTTATATTCTCAAGCTACAAGCTTGAGAGTGCTCCCTACTTAAATGCCTTGTTGTCGGATATATGCATATCGACTTCAGCTGCACCCACCATTTTACCACCCTACTATTTTGTGAATAATGGTGTCGAGTTCAATATGATTGATGGTGCTGCTGCAGCTGGGAATCCGACACAAGCTACAGTGAGTGAAGTGTTACAACACAATAAGTACCCCAAAATCCTAGTGTTGTCTTTAGGGACTGGAACAACAGCAATTGAGGAGATCTATGATGCTCAAACGGCAGCACATTGGAACCAGCTTAACTGGTTAGGCGTTATAAGTGATCTTCTTGCTCGTGGTTCAACAGCCATGATTGAATTCTACCTTGCTTCACTCTTCTCAGGCTTCCAACCTGAAAATACCTACCTTCGAATTGAGGAATATAACTTGGATCCTGCTTTCTCCAACCTGGTTGATGTTACACCAGAAAATTTGAAGGGTCTTAATGACACCGGAATAAATCTGTTACAAGAAAATGTTGTGAGAATGAATTTGGATACTTTTGATATAGAAGACGCAGGCGAAGGAACAAATGCTGAGGCTCTTGACAGGTTGGCTGAGATTTTGTATGAAGAAAGACAGGATCGTCTGAAACGAAAATCTACTAAAAGAGGAGGAAGATCATTTCTTGAAACTCCAAGTGAGTTCTATGCAGCTCTTAAAGCTTGGAAGAACCATGAATAA 1221 0.4111 MAHLLLVVLLFSAQLISGFSIQKLPPSDYGNVITILSIDGGGIKGIIPATVLNYLDKALKAKDPDADLAHYFDVIGGTSTGGLITAMLAAPSTEDPNHAAFTPAQIVDFYINEGPSIFNTSNPGKGPQFDGKFLHNITREKLKDTRLSQTLTNVVIPTFDLKRQKPVIFSSYKLESAPYLNALLSDICISTSAAPTILPPYYFVNNGVEFNMIDGAAAAGNPTQATVSEVLQHNKYPKILVLSLGTGTTAIEEIYDAQTAAHWNQLNWLGVISDLLARGSTAMIEFYLASLFSGFQPENTYLRIEEYNLDPAFSNLVDVTPENLKGLNDTGINLLQENVVRMNLDTFDIEDAGEGTNAEALDRLAEILYEERQDRLKRKSTKRGGRSFLETPSEFYAALKAWKNHE 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00741 406 PANTHER XYLOSE ISOMERASE 20 375 - -
Spst4g00741 406 Gene3D Cytosolic phospholipase A2 catalytic domain 25 381 - -
Spst4g00741 406 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 227 IPR002641 GO:0006629
Spst4g00741 406 Pfam Patatin-like phospholipase 36 225 IPR002641 GO:0006629
Spst4g00741 406 SUPERFAMILY FabD/lysophospholipase-like 32 346 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00741 Spst-Chr4 33440457 33442286 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00741 24 375 Miscellaneous Gene Families AT2G26560 44.186 5.92e-97 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00741 - - vun:114165690 555.444