Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00374 ATGAAGTTCCAAGACACTCATGACAACCCTTTTGGGAGCTCCACCACCACCCCAAAACACATGATCTCAAAAGTGACCTTGCTAGCCATATTGGTGATCCTAATACTAGCCATCACCCCTCTGTGGTACCCTCTGTTGAGTTACCATTCATCATCACTGTTGAAGATCAAGCAGAAGCTGAAGCACACTCCACCTTCTTCTTCTCATGATGATAACAGCAACCTGCCCTCAACATATGTGGAGAGGTGTGACATTTTCACAGGGGAGTGGGTGCCAAACCCTAAGGCACCATACTACACCAACAACACTTGTTGGGCAATTCATGAGCACCAGAACTGCATGAAGTATGGGAGGCCTGACTCGGAGTTCATGAAGTGGAGGTGGAAGCCTAGGGACTGTGACCTCCCCATTTTCAACCCTTTTCAGTTCTTGGAAATTGTTAAGGGCAAATCCATGGCCTTTGTTGGTGACTCTGTGGGTAGGAATCAGATGCAGTCCATGATTTGTCTCCTTTCTAGGGTGGAATGGCCAATAGATGTATCGTATGGTAGTGATGAGTATTTCAAGAGATGGAAGTACCCTAGTTACAACTTCACCATGGCAACTTTTTGGACACCCCATTTGGTAAGATCCAAAGTGGGTGATCCAAATGGTCCAAGCAACACTGGGCTTTTCAATCTGTACCTTGACGAGTATGACGAGAAATGGACCACACAAATACAAGAATTTGACTACATCATTGTTGATGGGGGGCATTGGTTCTACAGACCAATGGTGTTCTATGAGAGGAAGAGGATTGTGGGGTGCCATTTTTGCCTCTTGGAGAATGTCCCTGACTTGACCATGTTCTATGGCTATAGAAAGGCTTTCAGGACTGCTTTTAAGGCCATCAATGGCTTGGAAGAGTTCAAGGGCACAGTATTTCTTAGGACATTTGCACCTTCTCATTTTGAGAATGGGGTGTGGAATAAAGGTGGGAATTGTGTGAGAACCAAGCCATTTAGGAGTAGTGAGGCACAGTTAGAGGGCACAAATTTGGAGCTTTACATGATCCAATTGGAGGAGTTTAAGAAAGCTGAAAAAGAAGGTAGAAAGAAGGGTTTGAAGTTCAAGTTACTTGACACCACACAAGCTATGTTGTTGAGACCAGATGGTCATCCAAGTAGATATGGACATTGGCCACATGAGAATGTAACTCTGTATAATGATTGTGTTCATTGGTGCTTGCCAGGACCCATTGACACATGGAGTGATTTCTTCCTACAAATGTTGAAAATGGAGGGAATGAGATCTGCCATCAGCTAA 1305 0.4452 MKFQDTHDNPFGSSTTTPKHMISKVTLLAILVILILAITPLWYPLLSYHSSSLLKIKQKLKHTPPSSSHDDNSNLPSTYVERCDIFTGEWVPNPKAPYYTNNTCWAIHEHQNCMKYGRPDSEFMKWRWKPRDCDLPIFNPFQFLEIVKGKSMAFVGDSVGRNQMQSMICLLSRVEWPIDVSYGSDEYFKRWKYPSYNFTMATFWTPHLVRSKVGDPNGPSNTGLFNLYLDEYDEKWTTQIQEFDYIIVDGGHWFYRPMVFYERKRIVGCHFCLLENVPDLTMFYGYRKAFRTAFKAINGLEEFKGTVFLRTFAPSHFENGVWNKGGNCVRTKPFRSSEAQLEGTNLELYMIQLEEFKKAEKEGRKKGLKFKLLDTTQAMLLRPDGHPSRYGHWPHENVTLYNDCVHWCLPGPIDTWSDFFLQMLKMEGMRSAIS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00374 434 Pfam PMR5 N terminal Domain 82 134 IPR025846 -
Spst4g00374 434 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 37 421 IPR029962 GO:0016413
Spst4g00374 434 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 135 423 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00374 Spst-Chr4 4562363 4566708 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00374 - - gmx:100817694 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01576 1 19630004 19633890 Spst4g00374 4 4562363 4566708 PCT