Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00363 ATGACAGAGGTATTGGAGAAATTAAAAGATGAGGACTTCAAAAGAGTAGGCATTTGTGGAATGGGTGGAGTGGGAAAGACAACATTTGTGAAAGAAGTAATCAAAATTGTAGATGTATGGAAGTTATTTGATGAAGTTGTAATGGCAGTGGTTTCCCAAAATCTTGATTATATGAAAATTCAAGGACAAATTGCTGATGTTTTAAGCTTGAAATTTGATAAGGAGACACTCCAAGGAAGAGCTTATCAACTGCATGAAAGATTAAAAGGTATCAACAATGTCCTAATAATTTTTGATGATGTTTGGATAGACTTTGATTTTGAGTCTATTGGGATTCCTTCTCATGTGCATCACAAGAATTGTAAAATTTTATTGACATCAAGAATTGAAGATGTTTGTTATAAGATGGGATGTCAAAAGAATTTCGTAATTTCTATCTTGTCTCCGGATGAAAGTTGGGATCTTTTTAAAGATATGGTAGGTGGAAATGTTTCAACCAAGCTTGATATTCATCACATTGCAAAAGAGGTTGCAAATGAATGTGGGGGTTTGCCAATTGCCATTGTAACAATGGCAAAAGCATTAGCAAATAAAGAAAAATATGAATGGGAGGATGCATTGGATCAATTAAAAAAATCTTTTATGACTTCCCTTTCAGAAATGCAAGCATGTGTATATTCAAACATTAATGAATTGTGGAAAGTTAGAAATCGAGTACATACCATTGTTGATAGACTTAAAAGACGTTTCATGTTGTTAGATAGTAATGTGGATGAATGTGTCAAAATGCATGATGTTGTTCGAGATGTTATCATATCAATTGCATCTTCGAAAGAATGTGGTTTTATGGTACAATGTGATGGATCTCAAATGCAACAATTTAAAGAAGAAATGTGGTGTAATGACACTACGATTTCACTTATCTTTGAAGAAATGAAGGAACACATTAAAGTGTTAAATTGTCAAAAGCTTAAGCTTTTACAAGTAACATCAAAGCAAAGGGATTTAGTTCCAGAAAATTTCTTCCAATGTGTGAATAATCTCAAGGTGCTAAGTCTACAAAACATGGACATTCAGTCATTGTCTTCTGTATTTCAAACTTTAGACAATATTCATACTCTACTATTAGAAGATTGTCATGTTGGAGACATATCTATTATTGGTAAGAAACTCAAAAGACTTGAGATTCTAAGTTTTTCTAACTCAAATATCAAACAATTGCCAGAAGAAATTGGGCAACTAAGCTTACTGAGATTATTAGATTTAACTGAATGTAATTATCTCATTCGAATATCTGCTAATGTCTTAGCAAGGTTATCTAGATTAGAAGAACTCTATCTCAGAGTAAGAAATCTTCCTTCAGATGAAACTGGTCATATTTTGTCTGAGTTGCAATCTTTATCTCATCATCTAAAAGTTGTAGAGATTGCAATTTTGATAAATGAAGATGCACCCAAAGATTTGGTTTTTAAAAATATAATAAGATTTTGGGTCTACGTGGGAGATTCATCTACTCTTTTTGATGGCATTGTTCGAAAAGGATATTTTCACCCAAATATTTTGAAAGTAAATAATGCATATTACCGCTATATCAAGAGGAGTGTGACAATTCAATATTTACTTCAAAAAGTTGAAATTCTCAACTTAGTTGATATCAAGAACATGAAAAATGTCATATTGGAATTAAGTGAAAGGGGTTTTCCACTTTTGAAACATCTAAGCATTGAGTTTTGCAGCAACCTTGAATATGTTGTAGATACATTGGATGGTTGTATCTTTCCTCAACTTTTATCATTTTCTTTACGAAATTTGGATAATTTAAAAGAGATACTGAATGTAGCTGGTCACATGAGTCAAAATGACTTTGCCAAGGTTCACTCCACCATTATATCTCAGTGCTTTGGAACCCTTACAAATCTAAAAATAGAATATTGTAACAAGTTGAAGAATGTCTTCACATTGTTTCCAAGGAAAATTGATTTGACTACACTTCAATGTTTGCATGTGGCTGAAAGTTATGCAATTGAATGCATCATCTCAAGCAATAGTAAGTATGATGAAAAATTAATGATTGAGTTTTCAAATTTAGTGGAGTTGAAGTTACTGGAACTTCCCAGCCTGATCGGATTTTTTAAAGCCAATGTTATACATGAGCATAGCTCCTCAATGATCCAAATTCATGAATCCAGTGATCAAATAATTGAGAATGCAGTAATTGAAGATGGCCAAATGTCTAGTTCAAAATCAAGTGTTCATCATCAACCTATGCCCACTGGCACTCTTTTCAAATCAAACTGGATGCAATTGTTTCCAAAATTGGAAAAACTCTTCTTACATGCATGTTCTTCATTAGATATGGTGTTTGATATGCAAAAATCACAATTTCATGGTGAGTCACTGGCTTTCTTATTTGCTCAGTTGAAAGAAATAGAGATATCTTGGCTTAGTAAGTTAAGACACATTTGGGGTAATGCTCCAAGCTACATTCAAGGCTTTCAGAATTTGAAATCAATCAAAGTTAAGAAATGTGATTCTTTGGGGTTTCTTCTCACTCCCAACATTGCAAGGGCACTTACTCAACTTCAGAAAATGGTGATACATAGCTGCCACTCCATGGAGAAAATTGTTGGAAAAGAAGCAAACCTAAATGGTGAAGATGATGAAGAAAAGAATGTGGAAACCCTTGTCTTTGGTCAATTGGAATCTTTAACACTTATTGATCTCCCAAACCTTATGAGTATTTGTCCAGATTCCTATGAAATAATGTGGCCATCTTTGAGATTTTTATGCATTGATGGATGTCCTCAGCTTAAGACATCTGCCACTGTGGCAAGGCAAGAGAATTTCAATGCCTCATCAAGTGCTTCAAGAACATGTGATAATGCAAATAGTACTTCTAAAGAGGATTCACCAAGGTTTCTTCAGTGTTGCCTTGGATGCACCCCACATGTATTTTCCAACTTGAAGTCCAAGGCTTCATTAACAGAGAAAGATGTTCCTTCTGTCAGCAACATACATTCCAAAGCAGAAACAACATCCCCCATTCCAATTTTGGAGAAAATGCAAGTAAAAGGATGGGATTCACTAGAAGTCTTATTCCTTCTTAAACAAAACCAACTTTCTGATGATACTAATGCCAATTGTCTGGTGAAGCTGGTACTTGCAGAAGCACCTACAAGTCCCGTAGAAATAACTGCATTCAACAACCTCACTATTGAATATGCCACCTCTTCCCAAGAGGCATGTGCCTTAGAGTGGCCATCTTTGAAGAGAATTAGCATATCTCACTGTGGTGTGCTAGAAGTTGTTATTGGTAAAGTCGGGGAGAAAATAGATACCATGATTGCTTCATTTGCTCAACTACAGTCTCTTTCATTGAGCCATTTACCAAATGTTGTAAGCTTTTGTCTCACATCTTGTGCATCAGAACCACCATCCATTGAGAACATGCATGGGAGTGGCTATGAAAACCATGAGGGAACAAGTACTGAAGAAATCAGAATTATGAGACTTGATGCACTTATAAATGGCTTCATTTTTCCCAATCTGACATATATAGCAATAACTAGCTGCAACAAAGTTAGTTGTTTGTTCTCTCCTTCAACATCAACTAGCTTAGTGCGTTTGGTTGAGTTAGATATATGTGGGTGTAGGGAGATAGAGGAAATAGTGTCTACAGAAGAAACACAAGGAAATATGATTAACATTGTGTTCCACAGCTTGCAGCGTCTAAAACTTGAAAACCTACCAAAACTGAAGGCCTTCTGCCAGGGTTCCTATGGCTTTCATTTTCCATCATTGCATGAAGTATTGGTGAAAAGTTGCCACATGATGGAGACATTCTCTTATGAGTCTCCATACAGTCCAAAGTTGGAAGGAGTCATAATGGAAATTGGAAGCATAATGAAGAACATGTGGATGGGAGGTCTAAATGCTACTGTAGCACTTTGCAAAGGACTTTTGGCTTTTCAAACATCGGAGACACTTGAATGGATCAAGCAGGACCAATGCATACAGAGATACTTCACAGAAGAACAACAGTTGACAGTTGAAGGTTTTCAAAGGCTTCTAAAACTAGTTCCCTCCAATGTGATACACATATTTCAAAATCTAAAGGAACTCACTATAAAAAATTGTGGTTCACTAGTTGAGGTCTTTGAATCACATGGTGTGGATGCAAAGGAAATGCATTCCATGATACACTACAAGCTAGAAGCATTGAATTTGTATTTTCTACCAAAATTGACCCACCTATGGAAAAACTATGGTGGAGTTCTGGGATTCCAGAAGCTAAGAATACTAAAAGTGCAACACTGTGGCAACTTGAGTAGTTTGTTCTCTCCATCAATAGCCAGAAGTCTAGTGCAACTTAGGCACCTACGAGTTCATAGTTGCCACATGATGGAGGAAATAACTACTAAGGAAGATGAGGAAACAGAAGGATCAAATAATGCTATGATTGTATTTCCACTTTTGAGCAAGCTGGAGCTTCGTTATGTCCCCAACCTCAAATGTTTCTGCTCAGGAACTTTCAATATTGATCTTCCATCTTGTGAAGAAATGATAATTGAAAAATGTCCCAAGATGACTACCTTTTGCTATGGATATGTAACCACAGCAAAGCTTCTCCATATATATAAAGGTTCCTATGAGTATGTTGACATAATGAAAGACCTTAATATGACCATCTATCATGCTAATCGGAGTTTTAAGGTACAGACATTCTCCATATCATATACATTGCAGGTTGCGCTACAAACATCAGAGGCAATCACATGCATTGAGCATAGCCAACACCTGCTGCTGCCTTACTTAAGAAGTGATACAGAATTGGTTGTTGAAGGTAGTGAAAAACTATTGCATTGTATTCCATCCAACATGCTGCATAGGTTCCAGCATCTAAAACAAGTCAAGGTACATGATTGTGGTTCACTAGTTGAGATATTTGAATCAGAGGGAGTGGATGAAAATGGAGATGAAGGGTGTACCAAAACACCGTACAATTTTGATCTGCAGGAACTGCATCTGTATGATCTTCCTAAACTGATGCATATATGGAAAAATCATGGTGGAATCCTGCGCTTTATGAACCTTAAAAGGCTAAAGATTCGGCACTGTCATAGTTTGAAAAATGTGCTTTCTCTTTCCATGGCCAGAACCCTCTCACAACTCCAAGAGCTTTCAGTACATGAATGTGAGATGATAGAAGAGATCATCACTAGAGAGGAGGAAAAACTATCTGAAGAGCCAAACAAAGTCAAGATTACATTCCCAGCATTGCAATGGCTAACACTTTATCGCCTTCCAAGTCTTAGATGCTTCTGTTCAAGCACTTACCATTTTGAGCTGCCATCCTGCCATGACATAACCATTACAGAATGTCCTAAGATGGAGGCTTGCCATGGAAACAAAGGCACCTCAGAACTTCCTTTTGTCTCAACTAAGACAAATGATTTCAGAGCTGAAGAGAGTTCTTTTTAA 5481 0.362 MTEVLEKLKDEDFKRVGICGMGGVGKTTFVKEVIKIVDVWKLFDEVVMAVVSQNLDYMKIQGQIADVLSLKFDKETLQGRAYQLHERLKGINNVLIIFDDVWIDFDFESIGIPSHVHHKNCKILLTSRIEDVCYKMGCQKNFVISILSPDESWDLFKDMVGGNVSTKLDIHHIAKEVANECGGLPIAIVTMAKALANKEKYEWEDALDQLKKSFMTSLSEMQACVYSNINELWKVRNRVHTIVDRLKRRFMLLDSNVDECVKMHDVVRDVIISIASSKECGFMVQCDGSQMQQFKEEMWCNDTTISLIFEEMKEHIKVLNCQKLKLLQVTSKQRDLVPENFFQCVNNLKVLSLQNMDIQSLSSVFQTLDNIHTLLLEDCHVGDISIIGKKLKRLEILSFSNSNIKQLPEEIGQLSLLRLLDLTECNYLIRISANVLARLSRLEELYLRVRNLPSDETGHILSELQSLSHHLKVVEIAILINEDAPKDLVFKNIIRFWVYVGDSSTLFDGIVRKGYFHPNILKVNNAYYRYIKRSVTIQYLLQKVEILNLVDIKNMKNVILELSERGFPLLKHLSIEFCSNLEYVVDTLDGCIFPQLLSFSLRNLDNLKEILNVAGHMSQNDFAKVHSTIISQCFGTLTNLKIEYCNKLKNVFTLFPRKIDLTTLQCLHVAESYAIECIISSNSKYDEKLMIEFSNLVELKLLELPSLIGFFKANVIHEHSSSMIQIHESSDQIIENAVIEDGQMSSSKSSVHHQPMPTGTLFKSNWMQLFPKLEKLFLHACSSLDMVFDMQKSQFHGESLAFLFAQLKEIEISWLSKLRHIWGNAPSYIQGFQNLKSIKVKKCDSLGFLLTPNIARALTQLQKMVIHSCHSMEKIVGKEANLNGEDDEEKNVETLVFGQLESLTLIDLPNLMSICPDSYEIMWPSLRFLCIDGCPQLKTSATVARQENFNASSSASRTCDNANSTSKEDSPRFLQCCLGCTPHVFSNLKSKASLTEKDVPSVSNIHSKAETTSPIPILEKMQVKGWDSLEVLFLLKQNQLSDDTNANCLVKLVLAEAPTSPVEITAFNNLTIEYATSSQEACALEWPSLKRISISHCGVLEVVIGKVGEKIDTMIASFAQLQSLSLSHLPNVVSFCLTSCASEPPSIENMHGSGYENHEGTSTEEIRIMRLDALINGFIFPNLTYIAITSCNKVSCLFSPSTSTSLVRLVELDICGCREIEEIVSTEETQGNMINIVFHSLQRLKLENLPKLKAFCQGSYGFHFPSLHEVLVKSCHMMETFSYESPYSPKLEGVIMEIGSIMKNMWMGGLNATVALCKGLLAFQTSETLEWIKQDQCIQRYFTEEQQLTVEGFQRLLKLVPSNVIHIFQNLKELTIKNCGSLVEVFESHGVDAKEMHSMIHYKLEALNLYFLPKLTHLWKNYGGVLGFQKLRILKVQHCGNLSSLFSPSIARSLVQLRHLRVHSCHMMEEITTKEDEETEGSNNAMIVFPLLSKLELRYVPNLKCFCSGTFNIDLPSCEEMIIEKCPKMTTFCYGYVTTAKLLHIYKGSYEYVDIMKDLNMTIYHANRSFKVQTFSISYTLQVALQTSEAITCIEHSQHLLLPYLRSDTELVVEGSEKLLHCIPSNMLHRFQHLKQVKVHDCGSLVEIFESEGVDENGDEGCTKTPYNFDLQELHLYDLPKLMHIWKNHGGILRFMNLKRLKIRHCHSLKNVLSLSMARTLSQLQELSVHECEMIEEIITREEEKLSEEPNKVKITFPALQWLTLYRLPSLRCFCSSTYHFELPSCHDITITECPKMEACHGNKGTSELPFVSTKTNDFRAEESSF 1826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00363 1826 Gene3D Ribonuclease Inhibitor 277 704 IPR032675 -
Spst4g00363 1826 SUPERFAMILY L domain-like 1362 1797 - -
Spst4g00363 1826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 234 IPR027417 -
Spst4g00363 1826 SUPERFAMILY L domain-like 296 468 - -
Spst4g00363 1826 Gene3D Ribonuclease Inhibitor 975 1292 IPR032675 -
Spst4g00363 1826 Gene3D - 1 145 IPR027417 -
Spst4g00363 1826 PRINTS Disease resistance protein signature 88 102 - -
Spst4g00363 1826 PRINTS Disease resistance protein signature 15 30 - -
Spst4g00363 1826 PRINTS Disease resistance protein signature 181 195 - -
Spst4g00363 1826 PRINTS Disease resistance protein signature 412 428 - -
Spst4g00363 1826 Gene3D - 146 230 IPR042197 -
Spst4g00363 1826 Gene3D Ribonuclease Inhibitor 764 952 IPR032675 -
Spst4g00363 1826 Gene3D Ribonuclease Inhibitor 1342 1547 IPR032675 -
Spst4g00363 1826 Gene3D Ribonuclease Inhibitor 1616 1810 IPR032675 -
Spst4g00363 1826 SUPERFAMILY RNI-like 770 1136 - -
Spst4g00363 1826 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 740 940 - -
Spst4g00363 1826 SUPERFAMILY RNI-like 1172 1472 - -
Spst4g00363 1826 Pfam NB-ARC domain 2 221 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00363 Spst-Chr4 4458626 4469064 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00363 - - vra:106757704 2735.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00363 4 4458626 4469064 Spst4g00363 4 4458626 4469064 ECH