Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00052 ATGGGCAAGGATGAAAGCGACAGCAGGGCTCAGGGTTCATCTCTTATGCCAGAAAGTGAGAACGTGGTTCGAGGTTCAGAGCAGGAGCACAGGGAAGTTGTTGGGGGTTTCAGAAGTGAGGAAGGGTGTGGTGGGGTTGCTGTGAATGGAGATGGGTTTTCTGAAAACCAAGGGTTGGCTGATGAAGGGGTTGCTAACGTTGTCAAGAACAGGAAAGTCTTGGAGACCAATATTTCCGTTGGGAGTGAAAATGATTGTCAAGTTTTGACTGATTCTGAGGTGAATGGGATGTCCTCTTGGTTAGGAATGCAAGGAAGTGATATGAACACGGTGTTTTCTAGTGATGGCGCTGAGAAGTTGGACTATGATTGTGCATCTGAGAAGATGGACTATATGTTTGCTTCTGAGATGGAAGAGGCTGCTGATTTAAGTTTAGATGGTTCGGGAGGGGTTGTTGGAGGACATGGAAGTGATGGCGGCAGTAGTGGGGAGGAAGGAAAATATGAAGATTGTGATGCCGAAAATGTCACCGTTGCTTCGGAGAGTAGAGTGGCAGAAGTTGCTAGTTTGAGTGTGGATAGTATGGTAGGGGTTGGTGCTGAACACAAAATAGATAGGAAGGAAAGTGAAGACTGTGATGGGAACATTCGGGGTATTGATTCCGAGAGTAGAGGAGCGAAAACTGTTGTCTTGAGTGTGGATAGTTTGTTAGGAGTTCATGAGGACCGTGATGGGAACACTTTGGCTGTTGCATGTGTGAGTAGAGTACCAGAAGCTGCTGTATTGAGTGTGGATAGTTTGGTAGGGGTTGATGGGCAAGGCAGAAGAGAAGAGGATATAAGTGAAGATGGAGGTCAAGATGAAGACTGTGATGGGAATGATGTGACTATTCCTGCTGAGCGTAGGGCAGAAGAAGCTGCTGTTTTGAGTGTGGATAGGTTGGTAGGAGTTGGCAAGGATGACCGAAAAGAAGCAGAAGGTGGAGATGAAGACTGTGATGAGAATGTTGTGACTATTACTTCTGAGAGTAGAGTAGCAAAAGCTGCTGTTTCGAGTGCGGATAGTTTGGTCGGGGTTGGAGGGCAAGACAGAAAAGAAGGGGATATACGTGAAGAGGAAGGTAAAGATGAAGACTGTGATGGGGACATTGTGGCTGTTGCTTCTGAGAGTAAAGTTGCAGAAGCAGCTGCTTTGAGTGTGGATAGTTTGATAAATGTTGGTGGGGAAGACACACCGGGTGAAGACTGTGATGGGAACATTGTGACTCTTGCTTCAAAGAGTATAGTTGCAGAAGCTGCCGATTTTAGCGTGGATGGTTCAGTAGGCCTTGCTGCGGATGACAAAATAATGGAGGAGGAATGTGAAGACAAAGGAAATACGGCTGTTTTAAGTGTGGATGGCTCCGTAGCAGTTGATGTGGAGAAAAGAAAAGATGGGGGAGGAAGTGAAAGGGTAGAAAAAGAGGAAGATTGTTCTGGGAACATTGTGGCAATAGAGGTTCCAATTGCCGAGACAAGTGACCACATGGATGTAGATGTGAAGGACTTGAGTGATGAGGGGTATGGTTTCGCTGTTGGCGATTTTGTTTGGGGTCAAATTGAGAGTTATCCTTGGTGGCCTGGTCGGATTTATGACCCATCTGATGCATCTGAAGTTGCATTGAAGCTGAAACAAAAGAATAGACTTTTGGTTGCCTACTTTGGGCGTGGAACCTTTGCGTGGTGTCATCTGTCACAGTTAAAGACTTTTGCAGATAACTTTGATGATATGGTTAAACAGAGTAGCTGCATTGATTTTGTCAATGCTGTGCAAGAAGCTGCAAGTGAGGTTGGAAGGCTTCTGTCTATGAAGTTGAGTCGTTTAGTTGATGACAAGAAAACTGGTTCTGAATCTACACTCCCATTGGCGAGAAATTCTGGAATCAAAGAAGGAGTTCTTGTGCCAGAAACTGGTGTAGAGAGACTTTTATATAGTCACTTTGAGCCAGCAGAATTACTTTCTCATGTGAATCAAATTGCGCGAATTATTGATAGTGGTAGTAGCATTATGGAGCTGGAGATATTAAAGGCTCGGCTTTCTGCATATTATCTATCAAAAGGGCATAAATTGCCTGATTTTATGGATACTCAGCTGGTTCCTGGAGTTGAAGATAGTCTAATGGATGAAACAGTTGCTGTAGATAACAGTAAAAGTACCGTGGAAGCGCCAACCCAAGGGCCATTTGATGAACTGGGTCATTCTCCAGGGCTTTCAGGGAACTTATCGAACCATGTTAGAAAGCAGAAAAGCATTGCTGAAATAATGAGGGAGGACAAAGATGTTCATACAGCAAATAGAGAGGTGGAAGCAGCTGTTGAAATGGTGAACGCAATTGGCTCAAATGGTGGAAAGAAGAGGAAAGGTAGTGAGGATGGGTTGACATCTAAACCTGTTCAAAAGAAAAAAGAGGTTCTTCTAGACTCTGATGAAGATGTGTCAAGTGCTGAACTCTGTGCCGAGGAAAACAGTATTAGCATTGGCTCATGGATGCAGTCAAAAGAGAAGAAAGAAGATTTTGATGAAGGGAAGAGCGAAGAAAACAGGAAGGGTAGTTTGTCAAGAGAAAGGAAGAAAAGCAAGTACTTGTCCCCTCCTTTCACTACTCCAATCAGGGGGCAAATGGAGGAAATTATTGAGGCAGAATCGTTTAAAGTATCCAGAAAAGTTAAAGCATCACAGGCAAGGGAAGTGGCTGCTGTCCTGCAATATCCTCCAGTTTATATGGGGAGGCTGTTTGATAGCTCAAATTACCAAACCCAAGAAGATGATGGGGAAATGGTTATTGATCCGAAAAAAATCCAGGCTCCTGTGGAGGAAGTTCTGTCTCAAGTCCATAATGCAGCTATTAGTCCACAAATTCGTAGGGAGGGTACTTCTCTTGACCAATTTGTTGACTTCACCTATGCCTTCAGAAGTTCATTATATTCTGAAGGATCGTTATGCGATTTATACGAGAAGAATCAGCCTGGGAGGAAAAGAAAGAGGCCAGAATCTGAAGAAGATGGAATGTTGAAATATGGTCATATATCGTCACTGAAACAAAATTCTGGGCCAAAGAAGAAAAGAAAGGACACTGCTTCAGGTAAGGAGACTGATGAAAATGCTCCAGGTGCTGCTCTTGTTGTTTCATTTTGGCCAGGATCGTCTGTGCCCTCAAGATCTGACCTTATCTCAGTGTATAGTAAGTTTGGAGCTCTGAATGAAGCAGAAACTGATATGTTCGACAATAGCTACACAGCTAGAGTGTACTTCCTAAGAACTTCTGATGCTGAAAATGCATTCAACCATTCTCAAAACAATAACCCTTTTGGATCTTCTGATGTCACTTTTCAGCTCCAGTATTACTCTGATGGATCGAAGTTTGGACAACATGGTGAAAGATCTAAGAACAAACCTTTGCTAGCAGCTACACCACCACCGGTTTCACTCTCACAGGGTGGTGAAGCGTCCAGATTGATATTCATCCAGAAGAAGCTTCAAGGTCTGACTTTGATACTTGAAACATCAGGTGACAAATCTCCCGATTTGATGGCTAAACTACAGAGTGAGGTGAAGGCTCTTCTGGAGGATGTCAACCAAATGGTTGAAGCTTCTCTGTTTTAG 3642 0.4379 MGKDESDSRAQGSSLMPESENVVRGSEQEHREVVGGFRSEEGCGGVAVNGDGFSENQGLADEGVANVVKNRKVLETNISVGSENDCQVLTDSEVNGMSSWLGMQGSDMNTVFSSDGAEKLDYDCASEKMDYMFASEMEEAADLSLDGSGGVVGGHGSDGGSSGEEGKYEDCDAENVTVASESRVAEVASLSVDSMVGVGAEHKIDRKESEDCDGNIRGIDSESRGAKTVVLSVDSLLGVHEDRDGNTLAVACVSRVPEAAVLSVDSLVGVDGQGRREEDISEDGGQDEDCDGNDVTIPAERRAEEAAVLSVDRLVGVGKDDRKEAEGGDEDCDENVVTITSESRVAKAAVSSADSLVGVGGQDRKEGDIREEEGKDEDCDGDIVAVASESKVAEAAALSVDSLINVGGEDTPGEDCDGNIVTLASKSIVAEAADFSVDGSVGLAADDKIMEEECEDKGNTAVLSVDGSVAVDVEKRKDGGGSERVEKEEDCSGNIVAIEVPIAETSDHMDVDVKDLSDEGYGFAVGDFVWGQIESYPWWPGRIYDPSDASEVALKLKQKNRLLVAYFGRGTFAWCHLSQLKTFADNFDDMVKQSSCIDFVNAVQEAASEVGRLLSMKLSRLVDDKKTGSESTLPLARNSGIKEGVLVPETGVERLLYSHFEPAELLSHVNQIARIIDSGSSIMELEILKARLSAYYLSKGHKLPDFMDTQLVPGVEDSLMDETVAVDNSKSTVEAPTQGPFDELGHSPGLSGNLSNHVRKQKSIAEIMREDKDVHTANREVEAAVEMVNAIGSNGGKKRKGSEDGLTSKPVQKKKEVLLDSDEDVSSAELCAEENSISIGSWMQSKEKKEDFDEGKSEENRKGSLSRERKKSKYLSPPFTTPIRGQMEEIIEAESFKVSRKVKASQAREVAAVLQYPPVYMGRLFDSSNYQTQEDDGEMVIDPKKIQAPVEEVLSQVHNAAISPQIRREGTSLDQFVDFTYAFRSSLYSEGSLCDLYEKNQPGRKRKRPESEEDGMLKYGHISSLKQNSGPKKKRKDTASGKETDENAPGAALVVSFWPGSSVPSRSDLISVYSKFGALNEAETDMFDNSYTARVYFLRTSDAENAFNHSQNNNPFGSSDVTFQLQYYSDGSKFGQHGERSKNKPLLAATPPPVSLSQGGEASRLIFIQKKLQGLTLILETSGDKSPDLMAKLQSEVKALLEDVNQMVEASLF 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00052 1213 MobiDBLite consensus disorder prediction 147 169 - -
Spst4g00052 1213 CDD PWWP 526 609 - -
Spst4g00052 1213 ProSiteProfiles PWWP domain profile. 525 586 IPR000313 -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 272 292 - -
Spst4g00052 1213 Pfam PWWP domain 526 608 IPR000313 -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 792 825 - -
Spst4g00052 1213 Coils Coil 1190 1210 - -
Spst4g00052 1213 PANTHER ALDOLASE-RELATED 207 1138 - -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 999 1046 - -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 999 1019 - -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 844 874 - -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 7 21 - -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 357 376 - -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 23 37 - -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 842 880 - -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 797 822 - -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 729 756 - -
Spst4g00052 1213 Gene3D - 513 618 - -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 1134 1153 - -
Spst4g00052 1213 SUPERFAMILY Tudor/PWWP/MBT 519 626 - -
Spst4g00052 1213 SMART PWWP_4 523 584 IPR000313 -
Spst4g00052 1213 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00052 Spst-Chr4 589754 593395 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00052 - - pvu:PHAVU_004G012100g 1549.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00052 4 589754 593395 Spst4g00052 4 589754 593395 ECH