Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05190 ATGGCCAAAAAAGAAATAATCTTTGGACTTGGACTTTTGAACGAAGCGTTTGCAAATCACGTGACCACAACCACCCATGCCGATGCCGTAGTGTTCCCAACCCAAAACCAACCCAGAAGCTTTGCAAGCCAATTCCTGATCCCCCAGAATGCAGCACGAGCGTTGGTGAGGCAGCGTCCCTTGGTGTGGGACTCCAAACTGACACGCTATGCCCGGTGGTATGCGAACCAGAGGCGCAATGATTGCGCCCTTCAGCATTCCAATGGGCCTTATGGTGAGAACATATTCTGGGGCAGTGGCACAGGGTGGACGCCAGCACAAGCTGTTACTGCTTGGGTTGAAGAACGTCAATGGTACAACTATTGGCACAATTCTTGTGCAGGTGGACAGATGTGTGGACACTACACTCAGATTGTGTGGAACAGTACGAGGAAAGTTGGTTGTGCTAGCGTTGTTTGCTCTGGAGGGCAGGGCACCTTCATGACTTGCAACTATGATCCTCCCGGGAACTACTACGGAGAAAGACCTTACTGA 534 0.5112 MAKKEIIFGLGLLNEAFANHVTTTTHADAVVFPTQNQPRSFASQFLIPQNAARALVRQRPLVWDSKLTRYARWYANQRRNDCALQHSNGPYGENIFWGSGTGWTPAQAVTAWVEERQWYNYWHNSCAGGQMCGHYTQIVWNSTRKVGCASVVCSGGQGTFMTCNYDPPGNYYGERPY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05190 177 ProSitePatterns CRISP family signature 2. 160 171 IPR018244 GO:0005576
Spst3g05190 177 ProSitePatterns CRISP family signature 1. 133 143 IPR018244 GO:0005576
Spst3g05190 177 FunFam Putative pathogenesis-related protein 1 39 177 - -
Spst3g05190 177 CDD CAP_PR-1 44 177 - -
Spst3g05190 177 Gene3D CAP 41 177 IPR035940 -
Spst3g05190 177 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 40 174 IPR001283 -
Spst3g05190 177 SMART SCP_3 40 173 IPR014044 -
Spst3g05190 177 PRINTS Allergen V5/Tpx-1 family signature 160 173 IPR001283 -
Spst3g05190 177 PRINTS Allergen V5/Tpx-1 family signature 108 121 IPR001283 -
Spst3g05190 177 PRINTS Allergen V5/Tpx-1 family signature 61 79 IPR001283 -
Spst3g05190 177 PRINTS Allergen V5/Tpx-1 family signature 132 148 IPR001283 -
Spst3g05190 177 PRINTS Venom allergen 5 signature 61 79 IPR002413 -
Spst3g05190 177 PRINTS Venom allergen 5 signature 131 150 IPR002413 -
Spst3g05190 177 PRINTS Venom allergen 5 signature 106 121 IPR002413 -
Spst3g05190 177 Pfam Cysteine-rich secretory protein family 49 165 IPR014044 -
Spst3g05190 177 SUPERFAMILY PR-1-like 38 177 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05190 Spst-Chr3 103854381 103859199 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05190 - - gmx:100306470 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05190 3 103854381 103859199 Spst3g05190 3 103854381 103859199 ECH
Spst3g05190 3 103854381 103859199 Spst9g02952 9 63660700 63662395 PCT