Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05052 ATGAATGTTTTATTCCCATTGCACGAAGAAATCGTTTCATACCCTCAAACTCATTTTCCACGCAGATCTTCTTTCCTCTGCCCTCAGGTGAGTGAAATTTCACGTGCATTTCAATGGCTTCTTCCTTTATGTACATCTGACGCAAAAAACATGGAGTCTTTTCGTCGATTTAGAATGTGGGTATTCGTTTTTCTGTGTTTAATGTTTCAATCTGGAAATGGGTTTTACCTCCCGGGTAGTTACCCTCACAAGTATGGCATTGGGGATGAGTTGTGGGTGAAGGTGAATTCTCTGACTTCAATTGACACAGAAATGCCCTTTAGTTATTACAGTTTACCATTTTGTAAGCCTGAGGGTGGTGTCAAGGACAGTGCTGAGAATCTGGGTGAACTCCTTGTGGGGGATCGGATCGAGAACTCGCCTTATAGGTTTAAGATGTACACCAATGAGTCTGAGATATTTTTGTGTCAAGTGGATAAGCTCTCTGATGACCAGTTTAAGATCTTGAAGAAGAGAATTGATGAGATGTATCAGGTTAATTTGATACTTGATAATTTGCCTGCCATCAGGTTTACCAAGAAGGAGGACTACTTTTTGAGGTGGACTGGGTACCCTGTTGGTATCAAGATTCAGGATGTGTATTATTTGTTCAACCATCTGAGGTTTAATGTCCTTGTCCATAAGTATGAGGAGACCAATGTGGCACGTGTAATGGGCACCGGTGATGCGGCTGAAATGATCCCCACCATTGGAAAGGAGGGATCCGATAAGCCTGGTTACATGGTTGTTGGGTTTGAGGTCACACCTTGTAGCATTTTGCACAATGCTGATTCAGTTAAAGGGATGAAAATGTATAACAAATACCCGACGCCGATCAAATGTGATCCGTCCACAGTGGGGATGCCTATCAAGGAGGGGAAGCCGGTTGCATTTACATATGAAGTCACCTTTGAGGAGAGTGATATCAAGTGGCCATCTAGATGGGATGCCTACTTGAAGATGGAGGGGGCCAAAGTTCACTGGTTCTCGATCCTGAATTCGCTTATGGTGATCACTTTTCTTGCTGGTATTGTTCTTGTTATCTTCCTGAGGACTGTTAGGAGGGATCTGACCCGATATGAGGAGCTTGATATGGAGGCACAGGCACAGATGAACGAAGAATTATCTGGTTGGAAGCTTGTTGTGGGGGATGTTTTTCGTGCCCCAACAAATCCTGCTTTGCTGTGTATAATGGTTGGGGATGGAGTTCAGATTCTGGGGATGGCTGTTGTCACAATTTTGTTTGCTGCACTTGGATTCATGTCACCAGCCTCTCGTGGAACACTTATCACAGGTATGCTGTTTTTCTACATGATACTTGGTGTTGCTGCTGGTTATGTTGCAGTTCGGCTGTGGAGGACAATCGGCTGTGGCGATCAGAAGGGATGGATTTCCGTGGCGTGGAAGGCTGCTTGTTTCTTCCCTGGTATCGCCTTTTTGATCCTCACAACCTTGAACTTCCTCTTGTGGGGAAGCCACAGCACAGGAGCCATTCCATTTTCACTGTTTGTTATACTGATTTTGCTTTGGTTCTGCATTTCTGTTCCCCTTACCCTTATTGGTGGACTCTTTGGAGCAAGGGCACCTCACATTGAGTATCCAGTTCGAACCAATCAAATCCCTCGAGAAATTCCCCACCAGAGGTACCCATCATGGATTTTGGTTCTTGGCGCTGGCACCCTTCCATTTGGTACCTTGTTCATCGAGCTCTTCTTCATCATGTCTAGCATTTGGATGGGTCGTGTTTACTATGTATTTGGATTTCTCTTAATTGTTTTGATTCTTCTTGTGGTGGTGTGTGCTGAGGTATCTCTAGTTCTAACCTACATGCACCTGTGTGTGGAGGAGTGGAGATGGTGGTGGAAATCATTCTTTGCCTCTGGTTCTGTTGCCATATACATCTTTTTGTACTCCATAAACTACCTTGTATTTGACCTCAAGAATCTAAATGGGCCTGTTTCTGCAACTCTTTACTTGGGATACTCCTTATTCATGGTTCTAGCAATCATGTTGGCCACAGGCACAGTTGGATTCCTTTCCTCATTCTGGTTCGTCTATTACTTGTTCTCTTCGGTCAAGTTGGATTGA 2127 0.4424 MNVLFPLHEEIVSYPQTHFPRRSSFLCPQVSEISRAFQWLLPLCTSDAKNMESFRRFRMWVFVFLCLMFQSGNGFYLPGSYPHKYGIGDELWVKVNSLTSIDTEMPFSYYSLPFCKPEGGVKDSAENLGELLVGDRIENSPYRFKMYTNESEIFLCQVDKLSDDQFKILKKRIDEMYQVNLILDNLPAIRFTKKEDYFLRWTGYPVGIKIQDVYYLFNHLRFNVLVHKYEETNVARVMGTGDAAEMIPTIGKEGSDKPGYMVVGFEVTPCSILHNADSVKGMKMYNKYPTPIKCDPSTVGMPIKEGKPVAFTYEVTFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDMEAQAQMNEELSGWKLVVGDVFRAPTNPALLCIMVGDGVQILGMAVVTILFAALGFMSPASRGTLITGMLFFYMILGVAAGYVAVRLWRTIGCGDQKGWISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSLFVILILLWFCISVPLTLIGGLFGARAPHIEYPVRTNQIPREIPHQRYPSWILVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLLIVLILLVVVCAEVSLVLTYMHLCVEEWRWWWKSFFASGSVAIYIFLYSINYLVFDLKNLNGPVSATLYLGYSLFMVLAIMLATGTVGFLSSFWFVYYLFSSVKLD 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05052 708 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 74 708 IPR004240 GO:0016020
Spst3g05052 708 Pfam Endomembrane protein 70 106 660 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05052 Spst-Chr3 102252033 102254973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05052 51 708 Miscellaneous Gene Families AT5G35160 85.129 0.0 1143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05052 K17086 - gmx:100802084 1288.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05052 3 102252033 102254973 Spst3g05052 3 102252033 102254973 ECH
Spst3g05052 3 102252033 102254973 Spst9g02612 9 60125366 60128276 PCT