Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05044 ATGGCATCTCACGAGGCAAGGCCATTGGTGATGGAAATGGAACGGGCGGAAGATTTTGAAGAAGCTAGCAGCAGTGGGTGTGGGTGTGGATGCTTCCCAGGTTTTAAGTTGAAGAAGTGGTGGGAAGAACATGATGAAGAGGGTAAAGGGCTACTTGATGAGCAAAGGGGCGAGGGAGAGTCGTGGGTGGTGGAGAAGCTAAGGAAGGCAAAGGAGGCTTCAGAAGTGATTGCTGGTCCTAAGTGGAAGACTTTCATAAGAAAAATAAGTGGGTACGGGAAGAAGATGAAGCAGCAAAGAAACAGGTTCCAATATGATGAACACAGCTACGCTCTCAACTTCAATAGTGGGGCTCAGAGTGAAGATGAAGCCATGCCTTACAGCTTCTCAGCCAGGTTTGCTGCTCCAGGACGACGCCAAAATGAATCATGA 432 0.4861 MASHEARPLVMEMERAEDFEEASSSGCGCGCFPGFKLKKWWEEHDEEGKGLLDEQRGEGESWVVEKLRKAKEASEVIAGPKWKTFIRKISGYGKKMKQQRNRFQYDEHSYALNFNSGAQSEDEAMPYSFSARFAAPGRRQNES 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05044 143 PANTHER NHL DOMAIN PROTEIN 17 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05044 Spst-Chr3 102220581 102221012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05044 - - pvu:PHAVU_003G174800g 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05044 3 102220581 102221012 Spst9g02653 9 60604460 60604882 PCT