Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05024 ATGCCCACCACCTCAAACCTTAGCATATCCTACCCTTTTGGCACTACCCCATCAGCATCAGCATCATTAGCCATGGACTGGTTCTCCTGGCTATCCAGAACCACTCTTGAGCCCTCCTTAATCTACGACTATGGCCTCACCTTTGCACGCAATGAGCTTCAATTGGAGGATGCTTGCTACTTCAACCACGAGTTTCTTCAGAGCATGGGCATCTCAATTGCCAAGCACAGGCTAGAGATTCTCAAGCTTGTGAAGAAGGAAGGAGGAGGAAGAGGAGGAGGTCGTCCCAAGAAGCTCTCTGGGGTCATCAAGAAGTGTCTTAGGAAGTGCATGAACAAGTTTGTTTCTCGTGATGGTGATCATGTAGTGAAAGGCGTGCCCTCCTTGATGCCTGTGTCAGTGACACCACCTGATATTAATTGGTATCAAGGGAAACTAAAAGGGTCACCAATTGTGAGGAAGCAACTAGAAGGGTGTGAAGATGTTAAGGAAGAAAAGCCTCTACCTGTGCCCCCCATGTACAGAAGCAGAACCATAGCACTTTCAGGACCTTTGGATGGCAGTAGAATCATGCACGACAAAATGGTCCACAACAGGGCCTTGAAGCTATCTGGACCACTTGACGGAAGAATGCATGAGAGAATCATGAACTGTAATAGAAGCCCCTTAATACCTAGGCCTTTGGATGCAAGATTCTTAGCCGCAACAAAGAGTCCAAGAGTGTCTGGGCCTCTGGATCCAAGAGTCACGGTTGAGAACAAAAGCCGAAGACTGCGAAGGCCTTCGGACTCAACAAGGGCTGACATTGAAAGCCCAATGAGTTACAGTCCTTATAACAAGCCCAAAGCTGATTTTGATTATGACGATGACCACACACTCTGGCCTTCACTGTTTCAAGATCTGAAACCAACTTGA 915 0.4743 MPTTSNLSISYPFGTTPSASASLAMDWFSWLSRTTLEPSLIYDYGLTFARNELQLEDACYFNHEFLQSMGISIAKHRLEILKLVKKEGGGRGGGRPKKLSGVIKKCLRKCMNKFVSRDGDHVVKGVPSLMPVSVTPPDINWYQGKLKGSPIVRKQLEGCEDVKEEKPLPVPPMYRSRTIALSGPLDGSRIMHDKMVHNRALKLSGPLDGRMHERIMNCNRSPLIPRPLDARFLAATKSPRVSGPLDPRVTVENKSRRLRRPSDSTRADIESPMSYSPYNKPKADFDYDDDHTLWPSLFQDLKPT 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05024 304 Gene3D - 24 90 IPR013761 -
Spst3g05024 304 MobiDBLite consensus disorder prediction 250 266 - -
Spst3g05024 304 SUPERFAMILY SAM/Pointed domain 29 86 IPR013761 -
Spst3g05024 304 PANTHER OSJNBA0033G05.11 PROTEIN 25 304 - -
Spst3g05024 304 MobiDBLite consensus disorder prediction 237 282 - -
Spst3g05024 304 CDD SAM_superfamily 26 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05024 Spst-Chr3 102049451 102050365 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05024 - - gmx:100775936 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05024 3 102049451 102050365 Spst9g02680 9 60875358 60876188 PCT