Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04835 ATGGCGGACCAATACTCAAGCCCAGTCCAGGCCCAAGCCCAGAGACCTTCCCTCTCCGCCGAGTTCCTCCGGAAGCTCCAAGACCGGGCCCCCAACTCCTCCCACCTGGCCGGCATCCTCACCCTTCTCGTAACCGCCTCCGTTTTGCTCCTCCTGGCGGGTCTCACCCTCACAGGCACCGTTCTCGGCCTCATCTTTTTCACACCTCTCATCATCATCTCAAGCCCCGTGTGGGTCCCAGCTTCCACCCTCTTATTCCTAATCACCGCGGGTTTTCTCTCCGTCTGTGGATTCGGCGTTGCCCTCATCGCCGCCTTGTCATGGATTTACCGCTACTTCAGAGGGCTCCACCCGCCCGGTTCCGACCATGTCGACTACGCCCGGAGCCGCATATACGACACTGCCAGCCACGTGAAAGACTACGCCAGAGAATACGGTGGGTATTTGCAGAGCAAGGTGAAGGATGCAGCCCCCGGTGCGTGA 483 0.6025 MADQYSSPVQAQAQRPSLSAEFLRKLQDRAPNSSHLAGILTLLVTASVLLLLAGLTLTGTVLGLIFFTPLIIISSPVWVPASTLLFLITAGFLSVCGFGVALIAALSWIYRYFRGLHPPGSDHVDYARSRIYDTASHVKDYAREYGGYLQSKVKDAAPGA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04835 160 PANTHER OLEOSIN 29 155 IPR000136 GO:0012511|GO:0016020
Spst3g04835 160 Pfam Oleosin 36 146 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04835 Spst-Chr3 100049167 100049649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04835 20 160 Lipid Metabolism Gene Families AT3G18570 56.028 6.98e-49 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04835 - - vum:124837146 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04835 3 100049167 100049649 Spst3g04835 3 100049167 100049649 ECH