Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04832 ATGCTACAAAGAGTAGTGCGATATTCCGCTCAACCATTCAATCTTCCAACTCGCACGACACCACCCTTACTTTCGCCAATCCAATTAATACCCACTTCTCCATCTTTCCCAATCCTCAAACAGCAATGCAGATTATCACGTCGAGAGCTCACAATCTTCAGCAACTCTTGCTTGCTACTTCTCTTGGGTACTCAGGCAGTGGATGGATCCAGCGCAAGAGCAAAGGCAGACGTTGCAAACACAAACAACAGTGACCAACCACAAGAGAATGTGGTTTTAGCAGAAGATGTAGCTAACACAAGCAGCAGTGCTCAACCAGAAGGGAATCTGGTTTTAACAGAAGATGTTGCTATCACTAGTAACAGTGACCAACAAGAAGAAAATTTGAATTTAGCAGAAGAAAATGTAACTAACACAAGTAACAGTTATCAACCCGAAGAGAATATGACAACCACTTCCAGCTGCACTGAAAGAAAAATTACCAAACAAGTATTCTTAGACATATCTATTGATGCTGAACCTGCTGGTCGCATTACAATAGGGCTTTATGGAGATGAGGTCCCTTCAGGAGTTGATAGGTTCAGTAAGGTTGTAAGTGGAGCTGCTGGTATTAGCTACAGAAGAAAAGAGTTTGTCAAAATCATGCCCAATTATGTTCAACATGGTGGCCTTAGATCCTATGGCGTGGATGCTGAATTTGCTATGAGGACAGGTAGCAACTTGGGAGCTAATAGCCTGGTTCAAGAATGGGAGAGGGAGTATGAGAGATGTCCTGGGACTAAGAACGTGGCCGGAAGTGTAGGCATTATTGTGAGAAACCCATCAAAACCACCCCCGAAGATGAAGCTGGTTGCAAAACAAGGGAAGCTTCAGATTGATCAAGAAGAAGTAGGTATTGATCCCAATGGTACAGAATTTGTCATAGCTACAAAGGATTCACCAGAATTGGATTCATCGTCTCTGGTAATTGGAAGAGTAATTGGAGGCATGGAGGTCGTGCAAAGGATAGGTCAGGTTAAAACTGTACAAGAGAATACAGGATCTCCATATTTTAGGGTGGCAAAGCTTATAGGAGACAAGAGAGCTGTTGTAGCAGAAAGAGGATTCAATCGCCCTTATTCGAAGGTCGTGGTTACAAACTGTGGTTTAATGCAGTAA 1158 0.4292 MLQRVVRYSAQPFNLPTRTTPPLLSPIQLIPTSPSFPILKQQCRLSRRELTIFSNSCLLLLLGTQAVDGSSARAKADVANTNNSDQPQENVVLAEDVANTSSSAQPEGNLVLTEDVAITSNSDQQEENLNLAEENVTNTSNSYQPEENMTTTSSCTERKITKQVFLDISIDAEPAGRITIGLYGDEVPSGVDRFSKVVSGAAGISYRRKEFVKIMPNYVQHGGLRSYGVDAEFAMRTGSNLGANSLVQEWEREYERCPGTKNVAGSVGIIVRNPSKPPPKMKLVAKQGKLQIDQEEVGIDPNGTEFVIATKDSPELDSSSLVIGRVIGGMEVVQRIGQVKTVQENTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVVVTNCGLMQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04832 385 FunFam Peptidyl-prolyl cis-trans isomerase B 154 385 - -
Spst3g04832 385 SUPERFAMILY Cyclophilin-like 159 384 IPR029000 -
Spst3g04832 385 Gene3D - 151 385 IPR029000 -
Spst3g04832 385 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 165 383 IPR002130 GO:0000413|GO:0003755
Spst3g04832 385 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 167 344 IPR002130 GO:0000413|GO:0003755
Spst3g04832 385 Coils Coil 122 142 - -
Spst3g04832 385 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 13 385 IPR044185 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04832 K03768 - gmx:100800469 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04832 3 100011170 100012489 Spst3g04832 3 100011170 100012489 ECH