Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04831 ATGGCGCAAGATTCTGAAAAGAGATTTCATTCCATCATGGACAAGCTCTTCCATCCTCCCAAACCCCCTTCCTCCTCCAGTTCATCTGGAGTGCAGTTATCAGGGAGTAAGAAACGTCCTTACCAGTCAGGGTTTATGGAGTTGAGTCGGAGAGGGGATGTTGCTGAGGGACAACAGTCCTCCTCTGCGTCGTCCACCGCACTGCAGGGACCACTCTGCCGACCGTGGGATCGTGGTGACTTTATGAGGAGATTAGCTACATTCAAATCTATGTCATGGTTTGCTAAACCAAAGGTGGTGAGTGCTGTAAATTGTGCTAGTAGAGGTTGGACCAATGTGGATATTGATACCATAGCCTGTGAAGCATGTGGAGCACGTCTTCTTTTCTCTACACCAGCATCTTGGAATCAGCAACAAGTGGAGAAGGCAGCATTGGTATTTAGCCTAAAGTTGGATAATGGACATAAATTACTTTGCCCATGGATTGATAATGCCTGCAATGAAACACTGGCACGATTTCCTCCTACAACTCCTCAGATATTAGCTGATAATTTTAGAGAACACTGTTTTACACTATTGCAACTTTCAGCTCTTCCACGTATTTCACCTTCAGCTATAGACTACATCCGAAGCCAAAGCCCACTTCTGGAAGACTTTCTCGGACAATCTTTGATGCTGGAGTATGGAAATGGATCTACTGAAAATTCTGGGATTGGGGATGTTAGTAGTCAGGAGGAACTGAAATTTTATTATCAGGCTCAAAAGCTTATAAGTTTATGCGGTTGGAAACTTCGTCCTCTACCTTACGTTGTTGATTGGAAGGATATATCAGATCAGTCTCTTAAAAATACAACTAATCTTGCAGTTCATTCTACTGGCACAGATGAAAATAAAACTGATGAAAACTCCATGCAGTCTATTGGGGAACAAATGGATCCCAATTCTGCAGTATTAGATTGTACCCTGTGTGGGGCCACTATTGGATTGTGGGCATTCTCTACAGTTCCTCGGCCTGTAGAATCATTCAGATTAGAGGGATATGCTGAAGTGAACGGTGAAAATGCTTTTGTGGCCCACAATTTATTAAATAAAAATGATCTTGAAAATAGGCAGGATGGCATGCCTGATGTTGCAAATTCGTCAAAGGATACTTCTTCAAGTCTAAATATGACAATTGCAGGGGGTCCTCTCCCAACAAAGCAAAACTTTAAGGCAATAATATCTCTTCCCGTTATTGGTCAGAATTTAAGGGCTCGCCTTTCTTATGATTCTAATTTTAGGGATCATGCTTTTGTGGACAAAGTTGGTAATGAATCAAATTTACAGGAGAAAACTGACAATACCATTAATGCTGCTTCTATTGGACAACTTGTTCCTGTGTCATCTGAAATCACACAGATAGCAAATTGTGAAACTGGTTCTCAAGCAAGTATATCTGGTTCAGATGTTATAGTGGACACCCATCATGCAGGAGAATCATTTGCTCTTGAGGATAAGATGCCTATACACACAGATGCTGATAAATTGAATAGTTCAGCTGCAGGATATCCTAGTAATTCTCAGAAAGACTCTACAGAAGGTGAAGCACTTTCTGTTTCTCACAAGACTTTGGATGGCGGTGTTGGTAGTGACAGAGAAGAGAATCCTATTAGCAGTGACATCGTACATTCTAGTTTTGCTAAGTTTAAGAACCCCGCACCGTCTGATAAAGCAATGGAATTTGATCCAATCAAGCAACACAGACACTTTTGCCCCTGGATTGCATCAATAAATGACGGGGAAGCTGGGTGGAAACAAACGTTATCTGCTTTGTATCATCAGAAAAATCAGTTGCCACGATCACCAAATAGATCTCCATCATCTCTGCCCATTCTTAAGGTGGATGATCCTGTGGGTTCAATTAGAAAGCTTTTCATGTCTCCATCGACGAAAAAAATGAAGTCCACTCATATTACGGGGCAAAATACATAA 1971 0.4155 MAQDSEKRFHSIMDKLFHPPKPPSSSSSSGVQLSGSKKRPYQSGFMELSRRGDVAEGQQSSSASSTALQGPLCRPWDRGDFMRRLATFKSMSWFAKPKVVSAVNCASRGWTNVDIDTIACEACGARLLFSTPASWNQQQVEKAALVFSLKLDNGHKLLCPWIDNACNETLARFPPTTPQILADNFREHCFTLLQLSALPRISPSAIDYIRSQSPLLEDFLGQSLMLEYGNGSTENSGIGDVSSQEELKFYYQAQKLISLCGWKLRPLPYVVDWKDISDQSLKNTTNLAVHSTGTDENKTDENSMQSIGEQMDPNSAVLDCTLCGATIGLWAFSTVPRPVESFRLEGYAEVNGENAFVAHNLLNKNDLENRQDGMPDVANSSKDTSSSLNMTIAGGPLPTKQNFKAIISLPVIGQNLRARLSYDSNFRDHAFVDKVGNESNLQEKTDNTINAASIGQLVPVSSEITQIANCETGSQASISGSDVIVDTHHAGESFALEDKMPIHTDADKLNSSAAGYPSNSQKDSTEGEALSVSHKTLDGGVGSDREENPISSDIVHSSFAKFKNPAPSDKAMEFDPIKQHRHFCPWIASINDGEAGWKQTLSALYHQKNQLPRSPNRSPSSLPILKVDDPVGSIRKLFMSPSTKKMKSTHITGQNT 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04831 656 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 649 - -
Spst3g04831 656 Pfam C3HC zinc finger-like 75 196 IPR012935 GO:0008270
Spst3g04831 656 MobiDBLite consensus disorder prediction 1 15 - -
Spst3g04831 656 MobiDBLite consensus disorder prediction 507 530 - -
Spst3g04831 656 MobiDBLite consensus disorder prediction 21 39 - -
Spst3g04831 656 MobiDBLite consensus disorder prediction 54 69 - -
Spst3g04831 656 MobiDBLite consensus disorder prediction 511 530 - -
Spst3g04831 656 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04831 Spst-Chr3 100005169 100010814 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04831 - - pvu:PHAVU_003G178600g 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04831 3 100005169 100010814 Spst3g04831 3 100005169 100010814 ECH