Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04821 ATGGAGTCTGACGAAGAGGATTTTGTTTTCTATGGAACGCCGATAGAGCGTGAGGACGATTTACTCAGTCGCAAGAAGAAGGCCATTGCCGAGTCCTCGGGTCAACTACGAACGCTTCCCGCTTGGAAGCAAGAGGTTAGAGATGAGGAAGGGCGGAGAAGATTTCATGGAGCATTTACAGGAGGCTATTCTGCTGGTTACTATAATACAGTGGGCTCAAAGGAAGGGTGGGCACCCCAGTCATTTAAGTCATCCAGGAAGAACAGAGCTGAATTCAAAGAGCAGAATATACTGAATTTTCTAGATGAAGACGAGAAATCTGTTGGTTACTTAATTGGTGGCCGGGGTTCAGGGACTACTTCACAGTTTGATACATTTGGCTTCACAGCCGCTGAAATTGCCCGCAAACAAGTTGAGAAAGAACAGAAACAGAGGACTAAGGCTATGTGCCTTATCCTTGTGAGCCTTGTGCACTTGGCTGCCCTCTTTCATCTAAAGCCATCCATAATTCCTGGACCTGCTCCTGATGAAATAGTTGTTCCTGTCACTGAGTCTGTTGGGGTAAAACTGCTCTTGAAGATGGGGTGGAGTCGAGGCCGCACGATCAAGGATTCGCATTCTGATGCACTGTATGACGCCAGAAGACAGGCCCGTAGAGCTTTCTTAGCATTTTCTTCTGATGATCCAAAAGTGGAAGTTTCAGAGTCTGAGTCTGTCAAAGGTGATATTGAAAATTTTCCTGAGGAGCCTGTGAATGATGATGTCCAGTTTTCTAAGAGCACACCGTATGGTTCTTTCGGGATTGTGATGTGTGATGTTTATGTACTCAATCCAAAGCAAGACCTGCATGGATTAGGTTTTGATCCTTACAAGCATGCTCCTGAGTTTAGAGAGAACAAAAGATCACGCATAGCTAACAAGAGTGGACTTGGGTTCTCCAGTAGAGATAGTCTTTTTGGTTTGAAGTCAGGAAAGGCTGCCCCCGGTTTTGGTATTGGAGCTCTGGAGGAGCTTGATGCTGAGGATGAGGATGTCTATGCCACTGGTTATGAATTTGAAGATGCTTATGTTCAAGAAGTAGAAGAACCTTCAACATTGAGATTAGAAAACCAGACAAAGAAAGAGAAGAAGGATCAGGGTGATCTGCCTGGTTTCAGAGTTGCATCCAATTCTGACTATAAAATGGAAAGATTTGAGGCTCCTCTGGTTCCCAAGGATTTTGTGCCTCGCCATGAATTTTCGGGACCACTTGACATCAACCGCAAGACCTATGAAGTTACTCCACCAGATGCTCCTCCTCCAGAGGATGGAAATTTAAAATTATTAATTGAGGGGGTTGCCAATCTGGTAGCTAAATGTGGTAAATTATATGAGGATTTATCTAAAGAAAAGAATCAATCAAATCCATTGTTTAGTTTTCTTTCCGGAGGAACTGGCCATGAATATTATGCTAGGAAATTGTGGGAGGCACAGCAGAAACACAATGATCAGACTAGTCAACAATTGAATGGAAAAATGCCTCCCAGTGTGAAGAAGCTAACAGCTGAGAGCCGAGGCCAGATCTTAGGGGAAAAACCTCTAGAAAAAAGCTCCCAAATTCCATCCTCATCTGTTGCTTCTACTGATATTCAACTCCAATTTAATCTTACTGATACATTTACCAAGTCTGCGTCATTTAGTCAGTTAACGAATGTAGAAAATCCTTTCAAAGATGATCCAGCAAAGCAAGAAAGATTTGAGCTGTTTCTTAAGGAGAAATATAAAGGGGGATTACGCTCTGCAAGTTCTAGCTTAGCTAGTGATATGTCAGAGGCTGCTCGTGCTCAAGAAAGACTAAGTTTTGAGGCTGCAGCTGAGGCAATAGAAAAGGCACGACAGGGCAGGGGAAGCAAGCTTTTAAGTCCATCATCCATGGATTTTATCCCTGGTGGTGTTATGCAGTTTACTTCTAGTGAAGTAGAGCCAAAGAAAGACTTAAAAGCTGAAGATATTTTGAGGAAGAAAATGTACCCTAAGAGGGAAGAGTTCCAATGGCGTCCTTCACCTCTTTTGTGCAAACGCTTTGATCTTATTGATCCTTATATGGGGAAGCCACCGCCTGTTCCACGGATTAGGAGTAAAATGGATTCCTTGATTTTTACATCAGATTCAGTCAAAGGGATCAAAGTGGACGACCCTGAAACTTCAAAGAAGGAAATCTCATCTTTGCCACAATCTACTAATGAAGACATAACCAAAAGTATTACTGAAAACAAAACTGAGGGGGACGTGAAAGTTGAAAATATTGAAAGGCCAGTTGACCTATATAAGGCTATTTTTTCTGATGATTCAGAGGATGAAGGGGGAGATTCTGGTATTGGGAGAGTGGATAATCAAGAAAAGAAAGCTGAAGTAGCTAATACGGCATTGAGCCGATTGATTGCTGGTGATTTTCTGGAATCATTGGGCAAGGAACTAGGAATAGGGGTTCCTCCTGATATGCCTTACGCCACACAGAAGTCCAAGAACATTGCACTTCAGAAAGAACTTGTTAATGAAGATACAAGAACTGACATCCTCAAGAGTCAAAATAATGACGAGATGTCCTTAAATCATGATTTGCCATATGATCAGCAGATCGCCCGTGAGGATGTTCCATCAAAAGGTGACACTATTCATGGAAATATGCGTGAGAGCAGTAATGTGAACAGCAAGGGAAACAGTACCATGAACTATAGACCAGACAAATCTCATGAGGAGAATATCAAAGATGCCAGGAAGGTTAAAACCCCTGTAACACACCGCCGAGATTATAATAGCAGTTCTTCATTAGAAGAGGAAAAGAACAGAAAATGCTCCAGACACCATCGACATAAGAGGCGCAATGAAGGAAGCGATTCATCCGGCGATGATGAAAGAGATAGACAACACAGTTCAAGGTCAAAAGGGAGAAGGAAAGGTTCTTCCCGAGAAAAAAGCAGAAGTGAAAAACACTCAAAACATCACAAACACAGAAAGCATGAATCTCCAAATAGATCCTCTCGTTATAGCAATGAGAAGGACAATCCACATTCCAAAAATGAGAAAAGGCGAAGGGAATGA 3081 0.4245 MESDEEDFVFYGTPIEREDDLLSRKKKAIAESSGQLRTLPAWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWAPQSFKSSRKNRAEFKEQNILNFLDEDEKSVGYLIGGRGSGTTSQFDTFGFTAAEIARKQVEKEQKQRTKAMCLILVSLVHLAALFHLKPSIIPGPAPDEIVVPVTESVGVKLLLKMGWSRGRTIKDSHSDALYDARRQARRAFLAFSSDDPKVEVSESESVKGDIENFPEEPVNDDVQFSKSTPYGSFGIVMCDVYVLNPKQDLHGLGFDPYKHAPEFRENKRSRIANKSGLGFSSRDSLFGLKSGKAAPGFGIGALEELDAEDEDVYATGYEFEDAYVQEVEEPSTLRLENQTKKEKKDQGDLPGFRVASNSDYKMERFEAPLVPKDFVPRHEFSGPLDINRKTYEVTPPDAPPPEDGNLKLLIEGVANLVAKCGKLYEDLSKEKNQSNPLFSFLSGGTGHEYYARKLWEAQQKHNDQTSQQLNGKMPPSVKKLTAESRGQILGEKPLEKSSQIPSSSVASTDIQLQFNLTDTFTKSASFSQLTNVENPFKDDPAKQERFELFLKEKYKGGLRSASSSLASDMSEAARAQERLSFEAAAEAIEKARQGRGSKLLSPSSMDFIPGGVMQFTSSEVEPKKDLKAEDILRKKMYPKREEFQWRPSPLLCKRFDLIDPYMGKPPPVPRIRSKMDSLIFTSDSVKGIKVDDPETSKKEISSLPQSTNEDITKSITENKTEGDVKVENIERPVDLYKAIFSDDSEDEGGDSGIGRVDNQEKKAEVANTALSRLIAGDFLESLGKELGIGVPPDMPYATQKSKNIALQKELVNEDTRTDILKSQNNDEMSLNHDLPYDQQIAREDVPSKGDTIHGNMRESSNVNSKGNSTMNYRPDKSHEENIKDARKVKTPVTHRRDYNSSSSLEEEKNRKCSRHHRHKRRNEGSDSSGDDERDRQHSSRSKGRRKGSSREKSRSEKHSKHHKHRKHESPNRSSRYSNEKDNPHSKNEKRRRE 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04821 1026 MobiDBLite consensus disorder prediction 988 1003 - -
Spst3g04821 1026 Pfam Protein of unknown function (DUF1604) 39 106 IPR011666 GO:0006397
Spst3g04821 1026 Gene3D Surp module 404 497 IPR035967 GO:0003723|GO:0006396
Spst3g04821 1026 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 1 1024 - -
Spst3g04821 1026 Pfam Surp module 442 489 IPR000061 GO:0003723|GO:0006396
Spst3g04821 1026 SMART surpneu2 440 492 IPR000061 GO:0003723|GO:0006396
Spst3g04821 1026 FunFam G patch domain-containing protein TGH 406 496 - -
Spst3g04821 1026 SUPERFAMILY Surp module (SWAP domain) 421 492 IPR035967 GO:0003723|GO:0006396
Spst3g04821 1026 MobiDBLite consensus disorder prediction 362 386 - -
Spst3g04821 1026 MobiDBLite consensus disorder prediction 905 944 - -
Spst3g04821 1026 MobiDBLite consensus disorder prediction 879 1026 - -
Spst3g04821 1026 ProSiteProfiles SURP motif repeat profile. 442 486 IPR000061 GO:0003723|GO:0006396
Spst3g04821 1026 MobiDBLite consensus disorder prediction 955 971 - -
Spst3g04821 1026 MobiDBLite consensus disorder prediction 366 382 - -
Spst3g04821 1026 MobiDBLite consensus disorder prediction 886 904 - -
Spst3g04821 1026 MobiDBLite consensus disorder prediction 1004 1026 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04821 K13123 - gmx:100796934 1535.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04821 3 99937135 99949909 Spst3g04821 3 99937135 99949909 ECH