Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04812 ATGTTCCGCATAAGCAACACCGTAGTCGGCGCGCTCAACATCCTCACCCTGCTCCTGGGGGTGGCCGCCGTGGCCTCCTCCGCCTACATCCACATCCGCGGCGGTTCCGACTGCCAGAAGGTCCTGCAAGTGCCGCTGCTCGTGGGTGGCGTCTTTGTCGTGCTGGTCTCCGCATTGGGAATCGTGGGGGCGCTGTGCCGCGTCAACGTGGCGCTCTACGCCTACCTTTTCGTCACTTTGGCGCTTATCGTGGGCCTCGCCTTCTTCACTGTCTTCACGCTCTTCGTGACGAACAGGAAGGTGGGGCAGCAGGTTTCCGGGAAGGGATATGGCGAGTACAGGGTGGCAGATTTCTCTCACTGGTTGCAACGCTACGTCGTCAACAACAAGAACTGGGACGAGGTGAAGAGTTGCTTGATGGACGCGCACGTGTGCCAGAACCTCGCCCTCAACGGTGGCCGCAACAATGACTCGCTCATTTTCAAACACCTATCTACCACTCAGTCTGGTTGTTGTAAACCACCGGTGTATTGTGGGTTCATAATGAAGAATGCTACGTTCTGGGAAGTGCCAAAGAAGGGTCCAGCAGTGAATAGTTCTGACTGCACAACATGGAACAACGGGGAAGACAAACTGTGCTACGAGTGCAATTCATGCAAGGGAGGAGTTTTGGCCAACATAAGGAACCAATGGAGACGCCTCACTGTATTCAACGCATGTGTGCTTGTGCTCGTCACTGCCATATACTCCTTGGGCTGCTATGCCATCAAGAACAACAGAACCGATTCACGCTGGAACCACCGCAAAACACCATGTCCTTGA 822 0.5499 MFRISNTVVGALNILTLLLGVAAVASSAYIHIRGGSDCQKVLQVPLLVGGVFVVLVSALGIVGALCRVNVALYAYLFVTLALIVGLAFFTVFTLFVTNRKVGQQVSGKGYGEYRVADFSHWLQRYVVNNKNWDEVKSCLMDAHVCQNLALNGGRNNDSLIFKHLSTTQSGCCKPPVYCGFIMKNATFWEVPKKGPAVNSSDCTTWNNGEDKLCYECNSCKGGVLANIRNQWRRLTVFNACVLVLVTAIYSLGCYAIKNNRTDSRWNHRKTPCP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04812 273 PANTHER TETRASPANIN-8-RELATED 3 262 IPR044991 GO:0009734|GO:0016020
Spst3g04812 273 Pfam Tetraspanin family 6 250 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04812 Spst-Chr3 99854233 99855227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04812 1 264 Miscellaneous Gene Families AT1G18520 45.556 3.78e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04812 - - gmx:100815322 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04812 3 99854233 99855227 Spst3g04812 3 99854233 99855227 ECH