Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04802 ATGTCACGCGCTCGGACTGCCGTCCACTGCTTCCGCTACACCTACACCGCATTATCGTCAATCCTCTCATCCTCATCTGCAGTTACACGCTTTCAGCTCCCATGTCCCCAACAATGTCTCACGCGCGCACCCCTCCCCTTCCACTTTCACTCTCGTTATTCTTCATCTGTGCCCAAGCAAGCCTTAGACGGCGCCGTCGAGAATTATCCGAGTGGAGACTTTGATTTCAAGCCCCTCACTGGCTGGAAAAAATTCATCGTCAAGCTCAAGATGCTAACGGCTTTACCCTGGCACCGCCTCGGATACGGCACCGTTTTGACAATCAAGTTGCGCGGCCAGATATCGGATCAGCTGAAGAGTAGGTTCTCTCCGGGGTTATCTCTGCCTCAAATCTGTGATAATTTTTTGAAGGCGGCTTATGATCCTCGAATTTCCGGTATCTATCTCCACATTGATATTTTAAATTGCGGCTGGGCAAAGGTTGAGGAAATTCGAAGGCACATCTTCAATTTCAGACAATCAGGAAAATTTATTGTGGCTTATGTACCTTCATGTCGAGAAAAAGAATATTATATTGCAAGTGCGTGTGAAGAGATATATGTCCCTCCAAGTGCTTATTTTTGTTTGTTTGGATTGACTGTTCAAGCCCCGTTCTTCAGAGGTGTTTTAGAGAATCTTGGAATTGAACCAGAAGTGGAAAGGATTGGCAAGTACAAAAGTGTAGGAGATCAACTTACCCGAAGAACCATGTCTGAGGATCATCATGAGATGCTTACTGCTTTGCTTGATAATATCTATACATATTGGCTGGACAATGTCTCTGCTGCTAGAGGAAAGAAGAGAGAAGATTTTCAGAACTTAATAAACAGAGGTGTTTATCAAGTAGAGACACTTAAAGAAGAAGGCTTCATATCAGACATAATCTATGATGACGAGGTTATCACTAGGTTGAAGGAGAGACTTCAAGTAAAAACAAATAAAAATCTGCCTATGGTTGATTACAGAAAATACTCTGGAGTCAGGAAATCAACTCTTGGACTATCAGATGGTAAAGAATTAATAGCCATCATCCGAGCATCAGGGAGTATTCGTCGTATTGAGAGTCCACTAGGTGCCCGTAGCTCAGGTATCATTGGAGAGAAGTTAATTGAGAAGATACGCAGTGTTAGAGAGTCAAATAAATATAAGGCTGTTATTATCCGAATTGACAGTCCAGGAGGGGATGCTCTTGCTTCTGATTTGATGTGGAAAGAAATCAGGCTTCTGGCTGCCTCAAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGTTACTACATGGCAATGGGGGCTGGAGTTATTGTTGCAGAAAGTCTTACCTTAACTGGTTCAATTGGAGTGGTCACAGCAAAGCTTAACCTTGGGAAACTCTATGAGAAGATTGGCTTCAACAAAGAAATTATATCAAGGGGTAGATATGCAGAGCTGCGGGCAGCTGACCAACGTTCTTTTAGACCAGATGAAGCGGAGCTATTTTCCAAGTATGCACAGCATGCTTATAAACAATTTCGAGATAAAGCAGCCTTTTCCCGGTCTATGACTGTGGACAAGATGGAAGAGGTTGCACAGGGGAGGGTTTGGACTGGTAAGGATGCAGCTTCTCATGGTTTGATTGATGCTATTGGTGGTCTTTCTCGAGCTGTTGCCATAGCAAAATTGAAGGCTGGTATACCTCAAGACAAACAGGTTACTGTTGTGGAGCTCTCAAGACCCAGCCCTTCTCTACCTGAGATTTTAAGTGGTCTAGGTAATTCTCTCGTTGCAGTAGACAGAACTTTAAATGAATTACTACAGGACTTGACATTGTCCAATGGCGTCCAAGCCCGGATGGACGGAATCATGTTTGAGAAATTGGAAGGATATCAATACGCCAACCCCATTTTGGCATTGATAAAAGATTATCTTAGTTCCCTGTAG 1965 0.4356 MSRARTAVHCFRYTYTALSSILSSSSAVTRFQLPCPQQCLTRAPLPFHFHSRYSSSVPKQALDGAVENYPSGDFDFKPLTGWKKFIVKLKMLTALPWHRLGYGTVLTIKLRGQISDQLKSRFSPGLSLPQICDNFLKAAYDPRISGIYLHIDILNCGWAKVEEIRRHIFNFRQSGKFIVAYVPSCREKEYYIASACEEIYVPPSAYFCLFGLTVQAPFFRGVLENLGIEPEVERIGKYKSVGDQLTRRTMSEDHHEMLTALLDNIYTYWLDNVSAARGKKREDFQNLINRGVYQVETLKEEGFISDIIYDDEVITRLKERLQVKTNKNLPMVDYRKYSGVRKSTLGLSDGKELIAIIRASGSIRRIESPLGARSSGIIGEKLIEKIRSVRESNKYKAVIIRIDSPGGDALASDLMWKEIRLLAASKPVIASMSDVAASGGYYMAMGAGVIVAESLTLTGSIGVVTAKLNLGKLYEKIGFNKEIISRGRYAELRAADQRSFRPDEAELFSKYAQHAYKQFRDKAAFSRSMTVDKMEEVAQGRVWTGKDAASHGLIDAIGGLSRAVAIAKLKAGIPQDKQVTVVELSRPSPSLPEILSGLGNSLVAVDRTLNELLQDLTLSNGVQARMDGIMFEKLEGYQYANPILALIKDYLSSL 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04802 654 Gene3D - 499 624 - -
Spst3g04802 654 Gene3D - 102 213 - -
Spst3g04802 654 PANTHER PROTEASE 4 66 653 - -
Spst3g04802 654 PIRSF Protease_4_SppA 47 654 IPR004634 GO:0006465|GO:0008233|GO:0016020
Spst3g04802 654 CDD S49_SppA_67K_type 106 319 IPR047217 -
Spst3g04802 654 NCBIfam signal peptide peptidase SppA 355 568 IPR004635 GO:0006508|GO:0008233
Spst3g04802 654 Gene3D - 214 278 - -
Spst3g04802 654 Gene3D - 348 498 - -
Spst3g04802 654 Pfam Peptidase family S49 171 323 IPR002142 GO:0006508|GO:0008233
Spst3g04802 654 Pfam Peptidase family S49 422 572 IPR002142 GO:0006508|GO:0008233
Spst3g04802 654 SUPERFAMILY ClpP/crotonase 98 312 IPR029045 -
Spst3g04802 654 CDD S49_Sppa_N_C 354 568 IPR047272 -
Spst3g04802 654 SUPERFAMILY ClpP/crotonase 356 559 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04802 Spst-Chr3 99718625 99744275 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04802 K04773 - gmx:100809623 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04802 3 99718625 99744275 Spst3g04802 3 99718625 99744275 ECH