Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04793 ATGGAGCTGTGGAACAGAGCCCGAAGCTTTGCGGAAGAAGCTTCCAAACGATCTCATGATTTGTCCTTGGGAGCTTCCAAATTGAGCGACATCATAACAGAGACCACCAAAGAGATAGCGGTGCAAGCTTCCAAGCACTTGCCCCAACCTTCTCTCGTAAACGACGTCGATCTCCACCGTTTTGGCATCACCGAAGAGTTGAGAGAATTCGTCAAAGGGATCACCATCACTACCTTTGAAGATTTTCCCATTCAGGATGATTCGGAATTATCTGATGTTCCTGCGGTTTCAAATGTCAGGCAGGATCTAACTGATTGGCAGGAAAAACACGCTAGCCTTGTTCTTTCTACAGTCAAGGATTTGTGCTTCTGTTTGTTTGTTATTGAGCTCCAATCCAAGGCATTTGCATTGATTCAAGTGGTAATGATCCAGATGGATATTGGAGAAATAGAAGGAGGGGCGAGGATAGAGCAATGCAATCCACTCATGATAACTGGTGACATGTGCATCATGGTAAATAAAAAGATGCTTGGTATTCTTATTTCCAACTTTGTTGGAGCAAATCATTGGGTCAAAGACATTGCATTTTTTTCTTTGTTACAGGAGATTTCTAGATTGAGGTATGAACTGTGTCCACGAGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATACTGCACCCTATGAGAAACAGTACATGGAAGATGAAATACTAAAATCTTCTGAACATGTAAACGATCACAAAGTCACAATGGAACCCTTAAACCCTGAATTGATCTGTAAACAAGAGGCGCAAAAAGAGGCCAAATTAGCAAATTCATCAACTGAGAAAGACTTGGATGCATTTCTTCTGGGAGAAGGAAACAGTGATGATGAGCCTGATGATGGCGATGGAAAATATGATGATGATTTGGACAAACTGATGGATAATTCGATCACCAAAACCAATGTTAAACAATATGCGGCAAATAAAGGAGTCAGAGTTTACAAACTTTACAGGAATAGAAGCTGTGGTTAA 1038 0.4046 MELWNRARSFAEEASKRSHDLSLGASKLSDIITETTKEIAVQASKHLPQPSLVNDVDLHRFGITEELREFVKGITITTFEDFPIQDDSELSDVPAVSNVRQDLTDWQEKHASLVLSTVKDLCFCLFVIELQSKAFALIQVVMIQMDIGEIEGGARIEQCNPLMITGDMCIMVNKKMLGILISNFVGANHWVKDIAFFSLLQEISRLRYELCPRVMKERKFWRIYFILVNNHTAPYEKQYMEDEILKSSEHVNDHKVTMEPLNPELICKQEAQKEAKLANSSTEKDLDAFLLGEGNSDDEPDDGDGKYDDDLDKLMDNSITKTNVKQYAANKGVRVYKLYRNRSCG 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04793 345 SUPERFAMILY BSD domain-like 194 236 IPR035925 -
Spst3g04793 345 MobiDBLite consensus disorder prediction 290 311 - -
Spst3g04793 345 MobiDBLite consensus disorder prediction 292 306 - -
Spst3g04793 345 Pfam BSD domain 202 232 IPR005607 -
Spst3g04793 345 PANTHER BSD DOMAIN-CONTAINING PROTEIN 198 307 - -
Spst3g04793 345 ProSiteProfiles BSD domain profile. 202 232 IPR005607 -
Spst3g04793 345 Gene3D BSD domain 187 242 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04793 Spst-Chr3 99638533 99645347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04793 200 300 EF-hand Containing Proteins AT1G69030 46.078 2.56e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04793 - - vra:106768410 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04793 3 99638533 99645347 Spst3g04793 3 99638533 99645347 ECH