Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04787 ATGTCATCTTCAGAAAATAAACAGATGGGTTGGGCCATAGCTCTACACGGCGGCGCCGGCGACATACCCCTTTCACTACCACCGGAGAGACGGCAGCCGCGAGAGGAAGCTCTCCGCCACTGCCTTCAAATCGGCGTCGAAGCTCTCAAAGCCAAACTGCCTCCTCTCGACGTGGTTGAGCGCGTCGTTCGGGAGTTGGAGAACATTCCGCAGTTCAACGCGGGGAAGGGATCGGTGCTGACTTCCAAAGGCAGCGTCGAAATGGAAGCTTCCATCATGGACGGCACCACTATGAATTGCGGAGCTGTTTCCGGACTCACTACAGTCGTCAACGCCATCTCTCTCGCTCGATTGGTCATGGAGAAGACGCCTCACATTTATCTCGCTTTCGATGGAGCAGAGGAATTTGCAAGACAACAAGGCGTTGAGATTGTCGATTCAAGCCATTTTATTACTGCAGAAAACATTGAAAGGCTAAAGCATGCCAAAGAAGCCAATAGGGTCCAGATTGACTATACCCAACCTGTCCAAAACGATACTAAGAAAGAAACAACAATTGCTAATGGTGATAGTCAAATTGGAACTGTTGGGTGTGTGGCTGTTGATGGTAATGGAAACTTAGCTGCTGCAACGTCCACTGGCGGGTTAGTGAACAAAATGGTTGGTCGAATTGGTGACACACCGGTCATAGGTGCTGGGACCTATGCTGATGCACGTTGTGCGGTTTCAGCAACTGGTAAAGGTGAAGCAATAATACGTGGGACAGTGGCAAGAGATGTGGCTGCTCTGATAGAGTTTAAGGGTCTTACTCTCGAGGAAGCTGCGGCTTGTGTTGTTCATGAGCGCACGCCAAAAGGCACTGTTGGTTTGATTGCTGTGTCTGCCAAAGGAGAAGTTGCAATGCCTTTTAATACAACAGGCATGTTCAGAGCGTGTGCTACTGAAGATGGGTATTCTGAGATTGCAATTTGGCCTGCTGCCAAAATTGAATGA 993 0.4945 MSSSENKQMGWAIALHGGAGDIPLSLPPERRQPREEALRHCLQIGVEALKAKLPPLDVVERVVRELENIPQFNAGKGSVLTSKGSVEMEASIMDGTTMNCGAVSGLTTVVNAISLARLVMEKTPHIYLAFDGAEEFARQQGVEIVDSSHFITAENIERLKHAKEANRVQIDYTQPVQNDTKKETTIANGDSQIGTVGCVAVDGNGNLAAATSTGGLVNKMVGRIGDTPVIGAGTYADARCAVSATGKGEAIIRGTVARDVAALIEFKGLTLEEAAACVVHERTPKGTVGLIAVSAKGEVAMPFNTTGMFRACATEDGYSEIAIWPAAKIE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04787 330 PANTHER L-ASPARAGINASE 10 311 IPR000246 GO:0016787
Spst3g04787 330 Gene3D (Glycosyl)asparaginase 195 327 - -
Spst3g04787 330 FunFam Isoaspartyl peptidase/L-asparaginase 195 326 - -
Spst3g04787 330 CDD Asparaginase_2 12 317 - -
Spst3g04787 330 Pfam Asparaginase 11 324 IPR000246 GO:0016787
Spst3g04787 330 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11 324 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04787 Spst-Chr3 99596320 99598031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04787 13 302 Miscellaneous Gene Families AT4G00590 24.771 9.16e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04787 K13051 - gmx:100799400 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04787 3 99596320 99598031 Spst3g04787 3 99596320 99598031 ECH